Difference between revisions of "2.4.1.141-RXN"

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(Created page with "Category:reaction == Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN == * direction: ** left-to-right * common-name: ** deoxyribodipyrimidine photolyase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN-14841 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.313 ec-2.4.1.313] == Reaction formula == * 1 CPD...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN ==
+
== Reaction RXN-14841 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** deoxyribodipyrimidine photolyase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 ec-4.1.99.3]
+
** [http://enzyme.expasy.org/EC/2.4.1.313 ec-2.4.1.313]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-deoxycytidine-thymidine-dimer]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[DNA-Cytidines]][c] '''+''' 1 [[DNA-thymidines]][c]
+
* 1 [[CPD-14795]][c] '''+''' 1 [[Protein-GlcNAc-alpha-D-mannosyl-L-Thr]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Protein-GalNAc-GlcNAc-D-mannosyl-L-Thr]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08112]]
+
* Gene: [[SJ14363]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ00207]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04101]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13192]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
+
{{#set: ec-number=ec-2.4.1.313}}
−
* UNIPROT:
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
 
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
 
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
 
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
 
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
 
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
 
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
 
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
 
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
 
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
 
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
 
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
 
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
 
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
 
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
 
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=deoxyribodipyrimidine photolyase}}
 
−
{{#set: ec-number=ec-4.1.99.3}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:06, 14 January 2021

Reaction RXN-14841

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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