Difference between revisions of "2.4.1.229-RXN"

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(Created page with "Category:reaction == Reaction PDHe3mr == * direction: ** reversible * common-name: ** dihydrolipoamide dehydrogenase (e3), mitochondrial == Reaction formula == * 1.0 DIH...")
(Created page with "Category:reaction == Reaction NADH-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** nadh dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.6.99...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PDHe3mr ==
+
== Reaction NADH-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** dihydrolipoamide dehydrogenase (e3), mitochondrial
+
** nadh dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.6.99.3 ec-1.6.99.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[DIHYDROLIPOAMIDE]][m] '''+''' 1.0 [[NAD]][m] '''<=>''' 1.0 [[LIPOAMIDE]][m] '''+''' 1.0 [[NADH]][m] '''+''' 1.0 [[PROTON]][m]
+
* 1 [[Acceptor]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06474]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ19948]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15310]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09960]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21333]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18811]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21897]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ10422]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05715]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18864]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02821]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14995]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21137]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ22333]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19806]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16410]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19412]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02471]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21017]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04738]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11359 11359]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00281 R00281]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21301 P21301]
 +
** [http://www.uniprot.org/uniprot/O05267 O05267]
 +
** [http://www.uniprot.org/uniprot/P04394 P04394]
 +
** [http://www.uniprot.org/uniprot/P80861 P80861]
 +
** [http://www.uniprot.org/uniprot/P44856 P44856]
 +
** [http://www.uniprot.org/uniprot/P00393 P00393]
 +
** [http://www.uniprot.org/uniprot/P52504 P52504]
 +
** [http://www.uniprot.org/uniprot/O75380 O75380]
 +
** [http://www.uniprot.org/uniprot/Q7M2F7 Q7M2F7]
 +
** [http://www.uniprot.org/uniprot/Q7M2F8 Q7M2F8]
 +
** [http://www.uniprot.org/uniprot/Q7M2G8 Q7M2G8]
 +
** [http://www.uniprot.org/uniprot/Q7M2F9 Q7M2F9]
 +
** [http://www.uniprot.org/uniprot/Q7M2G0 Q7M2G0]
 +
** [http://www.uniprot.org/uniprot/Q7M2G1 Q7M2G1]
 +
** [http://www.uniprot.org/uniprot/Q7M2G2 Q7M2G2]
 +
** [http://www.uniprot.org/uniprot/Q7M2G3 Q7M2G3]
 +
** [http://www.uniprot.org/uniprot/Q7M2G4 Q7M2G4]
 +
** [http://www.uniprot.org/uniprot/Q7M2G7 Q7M2G7]
 +
** [http://www.uniprot.org/uniprot/P23934 P23934]
 +
** [http://www.uniprot.org/uniprot/P42116 P42116]
 +
** [http://www.uniprot.org/uniprot/P73739 P73739]
 +
** [http://www.uniprot.org/uniprot/P74614 P74614]
 +
** [http://www.uniprot.org/uniprot/Q35322 Q35322]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=dihydrolipoamide dehydrogenase (e3), mitochondrial}}
+
{{#set: common-name=nadh dehydrogenase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-1.6.99.3}}
 +
{{#set: nb gene associated=20}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:38, 5 January 2021

Reaction NADH-DEHYDROGENASE-RXN

  • direction:
    • reversible
  • common-name:
    • nadh dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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