Difference between revisions of "3-DEHYDROQUINATE-DEHYDRATASE-RXN"

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(Created page with "Category:reaction == Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** 10-formyltetrahydrofolate:l-methionyl-trnafmet n-form...")
(Created page with "Category:reaction == Reaction 2.4.1.119-RXN == * direction: ** left-to-right * common-name: ** dolichyl-diphosphooligosaccharide-protein glycotransferase ** dolichyl-dipho...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN ==
+
== Reaction 2.4.1.119-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase
+
** dolichyl-diphosphooligosaccharide-protein glycotransferase
 +
** dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9]
+
** [http://enzyme.expasy.org/EC/2.4.99.18 ec-2.4.99.18]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-18077]][c] '''+''' 1 [[CPD-224]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18164]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ08534]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04308]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18586]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19404]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12004]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02055]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic):
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50349 50349]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
 
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P94463 P94463]
+
** [http://www.uniprot.org/uniprot/P39656 P39656]
** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
+
** [http://www.uniprot.org/uniprot/P48440 P48440]
** [http://www.uniprot.org/uniprot/P50932 P50932]
+
** [http://www.uniprot.org/uniprot/P41543 P41543]
** [http://www.uniprot.org/uniprot/P47605 P47605]
+
** [http://www.uniprot.org/uniprot/P80896 P80896]
** [http://www.uniprot.org/uniprot/P44787 P44787]
+
** [http://www.uniprot.org/uniprot/P80897 P80897]
** [http://www.uniprot.org/uniprot/P56461 P56461]
+
** [http://www.uniprot.org/uniprot/P48439 P48439]
** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
+
** [http://www.uniprot.org/uniprot/P46964 P46964]
** [http://www.uniprot.org/uniprot/O51091 O51091]
+
** [http://www.uniprot.org/uniprot/Q92316 Q92316]
** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
+
** [http://www.uniprot.org/uniprot/Q10176 Q10176]
** [http://www.uniprot.org/uniprot/P23882 P23882]
 
** [http://www.uniprot.org/uniprot/P32785 P32785]
 
** [http://www.uniprot.org/uniprot/P75235 P75235]
 
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase}}
+
{{#set: common-name=dolichyl-diphosphooligosaccharide-protein glycotransferase|dolichyl-diphospho-oligosaccharide-protein glycosyltransferase}}
{{#set: ec-number=ec-2.1.2.9}}
+
{{#set: ec-number=ec-2.4.99.18}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=6}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:20, 14 January 2021

Reaction 2.4.1.119-RXN

  • direction:
    • left-to-right
  • common-name:
    • dolichyl-diphosphooligosaccharide-protein glycotransferase
    • dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links