Difference between revisions of "3-HYDROXY-PROPIONYL-COA"

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(Created page with "Category:gene == Gene SJ02704 == * transcription-direction: ** negative * right-end-position: ** 75071 * left-end-position: ** 71340 * centisome-position: ** 54.96614...")
(Created page with "Category:gene == Gene SJ20196 == * transcription-direction: ** positive * right-end-position: ** 74977 * left-end-position: ** 67311 * centisome-position: ** 31.855656...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02704 ==
+
== Gene SJ20196 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 75071
+
** 74977
 
* left-end-position:
 
* left-end-position:
−
** 71340
+
** 67311
 
* centisome-position:
 
* centisome-position:
−
** 54.96614    
+
** 31.855656    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
* [[GLUTAMIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[NAD-SYNTH-GLN-RXN]]
−
{{#set: right-end-position=75071}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=71340}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=54.96614   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NAD-SYNTH-NH3-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[CITRULBIO-PWY]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLUTAMINDEG-PWY]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7761]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5653]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PYRIDNUCSYN-PWY]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5381]]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=74977}}
 +
{{#set: left-end-position=67311}}
 +
{{#set: centisome-position=31.855656   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=7}}

Revision as of 09:27, 27 August 2019

Gene SJ20196

  • transcription-direction:
    • positive
  • right-end-position:
    • 74977
  • left-end-position:
    • 67311
  • centisome-position:
    • 31.855656

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • GLUTAMINDEG-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7761
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5653
    • 3 reactions found over 4 reactions in the full pathway
  • PYRIDNUCSAL-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




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