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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9532 RXN-9532] == | + | == Metabolite ACYL-COA == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase | + | ** an acyl-coa |
| − | ** fatty acid synthase
| + | == Reaction(s) known to consume the compound == |
| − | ** (r)-3-hydroxydodecanoyl-[acp] reductase
| + | * [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
| − | * ec-number: | + | * [[2.3.1.23-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
| + | * [[ACYL-COA-HYDROLASE-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] | + | * [[ACYL-COA-OXIDASE-RXN]] |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
| + | * [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
| − | == Reaction formula ==
| + | * [[PLASMALOGEN-SYNTHASE-RXN]] |
| − | * 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxydodecanoyl-ACPs]][c] | + | * [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]] |
| − | == Gene(s) associated with this reaction ==
| + | * [[RXN-13112]] |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[RXN-1381]] |
| − | * Gene: [[SJ15983]] | + | * [[RXN-1623]] |
| − | ** Category: [[annotation]] | + | * [[RXN-17729]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * [[SPHINGOSINE-N-ACYLTRANSFERASE-RXN]] |
| − | * Gene: [[SJ06617]]
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[annotation]] | + | * [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * [[2.3.1.23-RXN]] |
| − | * Gene: [[SJ19629]]
| + | * [[BUTYRATE--COA-LIGASE-RXN]] |
| − | ** Category: [[annotation]] | + | * [[PLASMALOGEN-SYNTHASE-RXN]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | + | * [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]] |
| − | * Gene: [[SJ03883]]
| + | * [[RXN-13112]] |
| − | ** Category: [[annotation]] | + | * [[SPHINGOSINE-N-ACYLTRANSFERASE-RXN]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ04443]]
| + | {{#set: common-name=an acyl-coa}} |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ10624]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ13014]]
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| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ11672]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ17743]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ04769]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ00613]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ18059]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | |
| − | * Gene: [[SJ06616]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ04229]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ06944]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ00320]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) ==
| |
| − | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| |
| − | * [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] | |
| − | ** '''31''' reactions found over '''31''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | == External links == | |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=3-oxo-dodecanoyl-[acyl-carrier protein] reductase|fatty acid synthase|(r)-3-hydroxydodecanoyl-[acp] reductase}} | |
| − | {{#set: ec-number=ec-1.1.1.100|ec-2.3.1.86|ec-2.3.1.85}}
| |
| − | {{#set: nb gene associated=16}}
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| − | {{#set: nb pathway associated=2}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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