Difference between revisions of "3.1.1.56-RXN"

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(Created page with "Category:reaction == Reaction 3.4.11.1-RXN == * direction: ** left-to-right * common-name: ** aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.9 ec-3.4.1...")
(Created page with "Category:reaction == Reaction PGLUCISOM-RXN == * direction: ** reversible * common-name: ** phosphoglucose isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3.1.9 e...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.11.1-RXN ==
+
== Reaction PGLUCISOM-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** aminopeptidase
+
** phosphoglucose isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.9 ec-3.4.11.9]
+
** [http://enzyme.expasy.org/EC/5.3.1.9 ec-5.3.1.9]
−
** [http://enzyme.expasy.org/EC/3.4.11.1 ec-3.4.11.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-With-N-Terminal-X-Pro]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-With-N-Terminal-Pro]][c]
+
* 1 [[D-glucopyranose-6-phosphate]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21022]]
+
* Gene: [[SJ00085]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00234]]
+
* Gene: [[SJ08179]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21020]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21032]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3801]], sucrose degradation II (sucrose synthase):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation:
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7347]], sucrose biosynthesis III:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[P341-PWY]], glycolysis V (Pyrococcus):
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III:
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5659]], GDP-mannose biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[RUMP-PWY]], formaldehyde oxidation I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6981]], chitin biosynthesis:
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6992]], 1,5-anhydrofructose degradation:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt:
 +
** '''12''' reactions found over '''15''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I:
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-622]], starch biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5054]], D-sorbitol biosynthesis I:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II:
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11819 11819]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00771 R00771]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P27888 P27888]
+
** [http://www.uniprot.org/uniprot/P06744 P06744]
−
** [http://www.uniprot.org/uniprot/P00727 P00727]
+
** [http://www.uniprot.org/uniprot/P28718 P28718]
−
** [http://www.uniprot.org/uniprot/P68767 P68767]
+
** [http://www.uniprot.org/uniprot/Q7LZP0 Q7LZP0]
−
** [http://www.uniprot.org/uniprot/P45334 P45334]
+
** [http://www.uniprot.org/uniprot/O83488 O83488]
−
** [http://www.uniprot.org/uniprot/Q9JTI8 Q9JTI8]
+
** [http://www.uniprot.org/uniprot/Q9JTW1 Q9JTW1]
−
** [http://www.uniprot.org/uniprot/Q9PP04 Q9PP04]
+
** [http://www.uniprot.org/uniprot/Q59000 Q59000]
−
** [http://www.uniprot.org/uniprot/P24828 P24828]
+
** [http://www.uniprot.org/uniprot/Q9PMD4 Q9PMD4]
−
** [http://www.uniprot.org/uniprot/P23341 P23341]
+
** [http://www.uniprot.org/uniprot/O25781 O25781]
−
** [http://www.uniprot.org/uniprot/P28839 P28839]
+
** [http://www.uniprot.org/uniprot/O84382 O84382]
−
** [http://www.uniprot.org/uniprot/P30184 P30184]
+
** [http://www.uniprot.org/uniprot/Q9JSS6 Q9JSS6]
−
** [http://www.uniprot.org/uniprot/P31427 P31427]
+
** [http://www.uniprot.org/uniprot/P81181 P81181]
−
** [http://www.uniprot.org/uniprot/Q42876 Q42876]
+
** [http://www.uniprot.org/uniprot/P08059 P08059]
−
** [http://www.uniprot.org/uniprot/Q48531 Q48531]
+
** [http://www.uniprot.org/uniprot/P50309 P50309]
−
** [http://www.uniprot.org/uniprot/O24022 O24022]
+
** [http://www.uniprot.org/uniprot/P13376 P13376]
−
** [http://www.uniprot.org/uniprot/Q10712 Q10712]
+
** [http://www.uniprot.org/uniprot/P13375 P13375]
−
** [http://www.uniprot.org/uniprot/Q43034 Q43034]
+
** [http://www.uniprot.org/uniprot/P12709 P12709]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P0A6T1 P0A6T1]
−
{{#set: common-name=aminopeptidase}}
+
** [http://www.uniprot.org/uniprot/P06745 P06745]
−
{{#set: ec-number=ec-3.4.11.9|ec-3.4.11.1}}
+
** [http://www.uniprot.org/uniprot/P13377 P13377]
−
{{#set: nb gene associated=4}}
+
** [http://www.uniprot.org/uniprot/P12341 P12341]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P18240 P18240]
 +
** [http://www.uniprot.org/uniprot/P29333 P29333]
 +
** [http://www.uniprot.org/uniprot/P34796 P34796]
 +
** [http://www.uniprot.org/uniprot/P34797 P34797]
 +
** [http://www.uniprot.org/uniprot/P54240 P54240]
 +
** [http://www.uniprot.org/uniprot/P54242 P54242]
 +
** [http://www.uniprot.org/uniprot/Q59088 Q59088]
 +
** [http://www.uniprot.org/uniprot/P78033 P78033]
 +
** [http://www.uniprot.org/uniprot/P52983 P52983]
 +
** [http://www.uniprot.org/uniprot/P49105 P49105]
 +
** [http://www.uniprot.org/uniprot/P42862 P42862]
 +
** [http://www.uniprot.org/uniprot/P42863 P42863]
 +
** [http://www.uniprot.org/uniprot/Q9SB57 Q9SB57]
 +
** [http://www.uniprot.org/uniprot/O82058 O82058]
 +
** [http://www.uniprot.org/uniprot/O82059 O82059]
 +
** [http://www.uniprot.org/uniprot/O61113 O61113]
 +
** [http://www.uniprot.org/uniprot/P78917 P78917]
 +
** [http://www.uniprot.org/uniprot/Q9RMC1 Q9RMC1]
 +
** [http://www.uniprot.org/uniprot/Q9X670 Q9X670]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=phosphoglucose isomerase}}
 +
{{#set: ec-number=ec-5.3.1.9}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=23}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:20, 15 January 2021

Reaction PGLUCISOM-RXN

  • direction:
    • reversible
  • common-name:
    • phosphoglucose isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum):
    • 10 reactions found over 13 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II:
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase):
    • 3 reactions found over 4 reactions in the full pathway
  • P122-PWY, heterolactic fermentation:
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-7347, sucrose biosynthesis III:
    • 1 reactions found over 3 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus):
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate):
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose):
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399, gluconeogenesis III:
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-5384, sucrose degradation IV (sucrose phosphorylase):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5659, GDP-mannose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6981, chitin biosynthesis:
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation:
    • 4 reactions found over 5 reactions in the full pathway
  • UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I:
    • 4 reactions found over 5 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt:
    • 12 reactions found over 15 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I:
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-622, starch biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5054, D-sorbitol biosynthesis I:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II:
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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