Difference between revisions of "3.1.4.11-RXN"

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(Created page with "Category:reaction == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == * direction: ** left-to-right * common-name: ** thioredoxin-disulfide reductase ** thioredoxin reductase * ec...")
(Created page with "Category:reaction == Reaction 3.1.4.11-RXN == * direction: ** left-to-right * common-name: ** phosphatidylinositol 4,5-bisphosphate lipase c ** phosphatidylinositol phosph...")
 
(5 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction THIOREDOXIN-REDUCT-NADPH-RXN ==
+
== Reaction 3.1.4.11-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** thioredoxin-disulfide reductase
+
** phosphatidylinositol 4,5-bisphosphate lipase c
** thioredoxin reductase
+
** phosphatidylinositol phospholipase c
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9]
+
** [http://enzyme.expasy.org/EC/3.1.4.11 ec-3.1.4.11]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
+
* 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ20221]]
* Gene: [[SJ16329]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06874]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ01778]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ09093]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ12278]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21339]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
+
* Gene: [[SJ16244]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ21344]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ00293]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08960]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ00760]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ04991]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ00931]]
+
* Gene: [[SJ16245]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ16658]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[THIOREDOX-PWY]], thioredoxin pathway:
+
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[LIPASYN-PWY]], phospholipases:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR108168
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33180 33180]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
+
** [http://www.uniprot.org/uniprot/P10687 P10687]
** [http://www.uniprot.org/uniprot/P56431 P56431]
+
** [http://www.uniprot.org/uniprot/P10894 P10894]
** [http://www.uniprot.org/uniprot/O28718 O28718]
+
** [http://www.uniprot.org/uniprot/P10686 P10686]
** [http://www.uniprot.org/uniprot/P80880 P80880]
+
** [http://www.uniprot.org/uniprot/P24135 P24135]
** [http://www.uniprot.org/uniprot/P43496 P43496]
+
** [http://www.uniprot.org/uniprot/P19174 P19174]
** [http://www.uniprot.org/uniprot/P94284 P94284]
+
** [http://www.uniprot.org/uniprot/Q00722 Q00722]
** [http://www.uniprot.org/uniprot/O66790 O66790]
+
** [http://www.uniprot.org/uniprot/Q02158 Q02158]
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
+
** [http://www.uniprot.org/uniprot/P32383 P32383]
** [http://www.uniprot.org/uniprot/P47348 P47348]
+
** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
+
** [http://www.uniprot.org/uniprot/Q24284 Q24284]
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
+
** [http://www.uniprot.org/uniprot/P51178 P51178]
** [http://www.uniprot.org/uniprot/O26804 O26804]
+
** [http://www.uniprot.org/uniprot/P10688 P10688]
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
+
** [http://www.uniprot.org/uniprot/P10895 P10895]
** [http://www.uniprot.org/uniprot/P43788 P43788]
+
** [http://www.uniprot.org/uniprot/Q60450 Q60450]
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
+
** [http://www.uniprot.org/uniprot/P08487 P08487]
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
+
** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
+
** [http://www.uniprot.org/uniprot/P40977 P40977]
** [http://www.uniprot.org/uniprot/P23160 P23160]
+
** [http://www.uniprot.org/uniprot/Q21754 Q21754]
** [http://www.uniprot.org/uniprot/P39916 P39916]
 
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
 
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
 
** [http://www.uniprot.org/uniprot/P38816 P38816]
 
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
 
** [http://www.uniprot.org/uniprot/P29509 P29509]
 
** [http://www.uniprot.org/uniprot/P52213 P52213]
 
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
 
** [http://www.uniprot.org/uniprot/P75531 P75531]
 
** [http://www.uniprot.org/uniprot/P74746 P74746]
 
** [http://www.uniprot.org/uniprot/P46843 P46843]
 
** [http://www.uniprot.org/uniprot/O54535 O54535]
 
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 
** [http://www.uniprot.org/uniprot/P52215 P52215]
 
** [http://www.uniprot.org/uniprot/P51978 P51978]
 
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=thioredoxin-disulfide reductase|thioredoxin reductase}}
+
{{#set: common-name=phosphatidylinositol phospholipase c|phosphatidylinositol 4,5-bisphosphate lipase c}}
{{#set: ec-number=ec-1.8.1.9}}
+
{{#set: ec-number=ec-3.1.4.11}}
{{#set: nb gene associated=13}}
+
{{#set: nb gene associated=3}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 3.1.4.11-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidylinositol 4,5-bisphosphate lipase c
    • phosphatidylinositol phospholipase c
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule:
    • 4 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY, phospholipases:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6367, D-myo-inositol-5-phosphate metabolism:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links