Difference between revisions of "3.4.21.53-RXN"

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(Created page with "Category:reaction == Reaction RXN0-6491 == * direction: ** left-to-right * common-name: ** dihydroorotate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5....")
(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * direction: ** reversible * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-6491 ==
+
== Reaction PROPIONYL-COA-CARBOXY-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** dihydroorotate dehydrogenase
+
** propionyl-coa carboxylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.5.2 ec-1.3.5.2]
+
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[Ubiquinols]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18134]]
+
* Gene: [[SJ12870]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08104]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6728]], methylaspartate cycle:
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 21: Line 34:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28690 28690]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=dihydroorotate dehydrogenase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
{{#set: ec-number=ec-1.3.5.2}}
+
* UNIPROT:
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P07633 P07633]
 +
** [http://www.uniprot.org/uniprot/P05165 P05165]
 +
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
 +
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
 +
** [http://www.uniprot.org/uniprot/O24789 O24789]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=propionyl-coa carboxylase}}
 +
{{#set: ec-number=ec-6.4.1.3}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:37, 5 January 2021

Reaction PROPIONYL-COA-CARBOXY-RXN

  • direction:
    • reversible
  • common-name:
    • propionyl-coa carboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 5 reactions found over 13 reactions in the full pathway
  • PROPIONMET-PWY, propanoyl CoA degradation I:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728, methylaspartate cycle:
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links