Difference between revisions of "3.4.21.53-RXN"

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(Created page with "Category:reaction == Reaction PROPIONYL-COA-CARBOXY-RXN == * direction: ** reversible * common-name: ** propionyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org...")
(Created page with "Category:reaction == Reaction RXN0-6491 == * direction: ** left-to-right * common-name: ** dihydroorotate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PROPIONYL-COA-CARBOXY-RXN ==
+
== Reaction RXN0-6491 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** propionyl-coa carboxylase
+
** dihydroorotate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
+
** [http://enzyme.expasy.org/EC/1.3.5.2 ec-1.3.5.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[Ubiquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12870]]
+
* Gene: [[SJ18134]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ08104]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PROPIONMET-PWY]], propanoyl CoA degradation I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 34: Line 21:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28690 28690]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859]
+
{{#set: common-name=dihydroorotate dehydrogenase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-1.3.5.2}}
−
** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P07633 P07633]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P05165 P05165]
 
−
** [http://www.uniprot.org/uniprot/Q06101 Q06101]
 
−
** [http://www.uniprot.org/uniprot/Q20676 Q20676]
 
−
** [http://www.uniprot.org/uniprot/O24789 O24789]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=propionyl-coa carboxylase}}
 
−
{{#set: ec-number=ec-6.4.1.3}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=5}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:19, 14 January 2021

Reaction RXN0-6491

  • direction:
    • left-to-right
  • common-name:
    • dihydroorotate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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