Difference between revisions of "3.4.24.64-RXN"

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(Created page with "Category:reaction == Reaction ARGSUCCINLYA-RXN == * direction: ** reversible * common-name: ** argininosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.1...")
(Created page with "Category:reaction == Reaction 3.4.24.64-RXN == * direction: ** left-to-right * common-name: ** mitochondrial-processing peptidase * ec-number: ** [http://enzyme.expasy.org...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ARGSUCCINLYA-RXN ==
+
== Reaction 3.4.24.64-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** argininosuccinate lyase
+
** mitochondrial-processing peptidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
+
** [http://enzyme.expasy.org/EC/3.4.24.64 ec-3.4.24.64]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
+
* 1 [[Mitochondrial-Preproteins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MPP-processed-mitochonrial-proteins]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20639]]
+
* Gene: [[SJ13715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09586]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08789]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13651]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4984]], urea cycle:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115538
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50987 P50987]
+
** [http://www.uniprot.org/uniprot/P11913 P11913]
−
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
+
** [http://www.uniprot.org/uniprot/P20069 P20069]
−
** [http://www.uniprot.org/uniprot/P11447 P11447]
+
** [http://www.uniprot.org/uniprot/P23955 P23955]
−
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
+
** [http://www.uniprot.org/uniprot/Q9T2S9 Q9T2S9]
−
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
+
** [http://www.uniprot.org/uniprot/Q9T2S8 Q9T2S8]
−
** [http://www.uniprot.org/uniprot/P44314 P44314]
+
** [http://www.uniprot.org/uniprot/P10507 P10507]
−
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
+
** [http://www.uniprot.org/uniprot/P29677 P29677]
−
** [http://www.uniprot.org/uniprot/P33110 P33110]
+
** [http://www.uniprot.org/uniprot/Q03346 Q03346]
−
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
+
** [http://www.uniprot.org/uniprot/Q41440 Q41440]
−
** [http://www.uniprot.org/uniprot/P40369 P40369]
+
** [http://www.uniprot.org/uniprot/Q9UG64 Q9UG64]
−
** [http://www.uniprot.org/uniprot/P50988 P50988]
+
** [http://www.uniprot.org/uniprot/Q9P7X1 Q9P7X1]
−
** [http://www.uniprot.org/uniprot/P73257 P73257]
+
** [http://www.uniprot.org/uniprot/P11914 P11914]
−
** [http://www.uniprot.org/uniprot/P50514 P50514]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P04076 P04076]
+
{{#set: common-name=mitochondrial-processing peptidase}}
−
** [http://www.uniprot.org/uniprot/P04424 P04424]
+
{{#set: ec-number=ec-3.4.24.64}}
−
** [http://www.uniprot.org/uniprot/P20673 P20673]
+
{{#set: nb gene associated=4}}
−
</div>
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: common-name=argininosuccinate lyase}}
 
−
{{#set: ec-number=ec-4.3.2.1}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 3.4.24.64-RXN

  • direction:
    • left-to-right
  • common-name:
    • mitochondrial-processing peptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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