Difference between revisions of "3.4.24.64-RXN"

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(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN == * direction: ** reversible * common-name: ** 3-dehydroquinate dehydratase * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction 3.4.24.64-RXN == * direction: ** left-to-right * common-name: ** mitochondrial-processing peptidase * ec-number: ** [http://enzyme.expasy.org...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN ==
+
== Reaction 3.4.24.64-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** 3-dehydroquinate dehydratase
+
** mitochondrial-processing peptidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.10 ec-4.2.1.10]
+
** [http://enzyme.expasy.org/EC/3.4.24.64 ec-3.4.24.64]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[Mitochondrial-Preproteins]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MPP-processed-mitochonrial-proteins]][c] '''+''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ01054]]
+
* Gene: [[SJ13715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ08386]]
+
* Gene: [[SJ09586]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ10493]]
+
* Gene: [[SJ08789]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13651]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13450]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6707]], gallate biosynthesis:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
 
** '''6''' reactions found over '''5''' reactions in the full pathway
 
* [[QUINATEDEG-PWY]], quinate degradation I:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6416]], quinate degradation II:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115538
* METANETX-RXN : MNXR97449
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21099 21099]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
 
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P05195 P05195]
+
** [http://www.uniprot.org/uniprot/P11913 P11913]
** [http://www.uniprot.org/uniprot/P46380 P46380]
+
** [http://www.uniprot.org/uniprot/P20069 P20069]
** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
+
** [http://www.uniprot.org/uniprot/P23955 P23955]
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/Q9T2S9 Q9T2S9]
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/Q9T2S8 Q9T2S8]
** [http://www.uniprot.org/uniprot/P43878 P43878]
+
** [http://www.uniprot.org/uniprot/P10507 P10507]
** [http://www.uniprot.org/uniprot/P05194 P05194]
+
** [http://www.uniprot.org/uniprot/P29677 P29677]
** [http://www.uniprot.org/uniprot/Q58849 Q58849]
+
** [http://www.uniprot.org/uniprot/Q03346 Q03346]
** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
+
** [http://www.uniprot.org/uniprot/Q41440 Q41440]
** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
+
** [http://www.uniprot.org/uniprot/Q9UG64 Q9UG64]
** [http://www.uniprot.org/uniprot/P05147 P05147]
+
** [http://www.uniprot.org/uniprot/Q9P7X1 Q9P7X1]
** [http://www.uniprot.org/uniprot/P24670 P24670]
+
** [http://www.uniprot.org/uniprot/P11914 P11914]
** [http://www.uniprot.org/uniprot/P35146 P35146]
+
{{#set: direction=left-to-right}}
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
+
{{#set: common-name=mitochondrial-processing peptidase}}
** [http://www.uniprot.org/uniprot/Q48255 Q48255]
+
{{#set: ec-number=ec-3.4.24.64}}
** [http://www.uniprot.org/uniprot/P73367 P73367]
 
** [http://www.uniprot.org/uniprot/O65917 O65917]
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: common-name=3-dehydroquinate dehydratase}}
 
{{#set: ec-number=ec-4.2.1.10}}
 
 
{{#set: nb gene associated=4}}
 
{{#set: nb gene associated=4}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 3.4.24.64-RXN

  • direction:
    • left-to-right
  • common-name:
    • mitochondrial-processing peptidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links