Difference between revisions of "3.6.1.52-RXN"

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(Created page with "Category:reaction == Reaction 4.3.1.17-RXN == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.17...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CPD-315 == * direction: ** reversible == Reaction formula == * 1.0 CPD-315[C-BOUNDARY] '''<=>''' 1.0 CPD-315[e] == Gene(...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 4.3.1.17-RXN ==
+
== Reaction ExchangeSeed-CPD-315 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** l-serine ammonia-lyase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.3.1.17 ec-4.3.1.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
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* 1.0 [[CPD-315]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-315]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15468]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ08066]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19170 19170]
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{{#set: nb gene associated=0}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
 
−
** [http://www.uniprot.org/uniprot/P30744 P30744]
 
−
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
 
−
** [http://www.uniprot.org/uniprot/P56072 P56072]
 
−
** [http://www.uniprot.org/uniprot/P25379 P25379]
 
−
** [http://www.uniprot.org/uniprot/P16095 P16095]
 
−
** [http://www.uniprot.org/uniprot/P20132 P20132]
 
−
** [http://www.uniprot.org/uniprot/P09367 P09367]
 
−
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 
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** [http://www.uniprot.org/uniprot/P17324 P17324]
 
−
** [http://www.uniprot.org/uniprot/P80212 P80212]
 
−
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=l-serine ammonia-lyase}}
 
−
{{#set: ec-number=ec-4.3.1.17}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 08:40, 15 March 2021

Reaction ExchangeSeed-CPD-315

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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