Difference between revisions of "4.2.3.12-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5436 PWY-5436] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] **...")
(Created page with "Category:reaction == Reaction 4.2.3.12-RXN == * direction: ** left-to-right * common-name: ** 6-pyruvoyl-tetrahydropterin synthase * ec-number: ** [http://enzyme.expasy.or...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5436 PWY-5436] ==
+
== Reaction 4.2.3.12-RXN ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
+
** left-to-right
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
 
 
* common-name:
 
* common-name:
−
** l-threonine degradation iv
+
** 6-pyruvoyl-tetrahydropterin synthase
−
== Reaction(s) found ==
+
* ec-number:
−
* [[THREONINE-ALDOLASE-RXN]]
+
** [http://enzyme.expasy.org/EC/4.2.3.12 ec-4.2.3.12]
−
== Reaction(s) not found ==
+
== Reaction formula ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=ACETALD-DEHYDROG-RXN ACETALD-DEHYDROG-RXN]
+
* 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[6-PYRUVOYL-5678-TETRAHYDROPTERIN]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[PROTON]][c]
−
{{#set: taxonomic-range=tax-2|tax-4751}}
+
== Gene(s) associated with this reaction  ==
−
{{#set: common-name=l-threonine degradation iv}}
+
* Gene: [[SJ00075]]
−
{{#set: nb reaction found=1}}
+
** Category: [[annotation]]
−
{{#set: completion rate=0.5}}
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: nb total reaction=2}}
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00496]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
== Pathway(s) ==
 +
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5664]]:
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
* METANETX-RXN : MNXR141260
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22049 22049]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04286 R04286]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=6-pyruvoyl-tetrahydropterin synthase}}
 +
{{#set: ec-number=ec-4.2.3.12}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 4.2.3.12-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6-pyruvoyl-tetrahydropterin synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7442, drosopterin and aurodrosopterin biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5663, erythro-tetrahydrobiopterin biosynthesis I:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5664:
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-6983, threo-tetrahydrobiopterin biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR141260
  • RHEA:
  • LIGAND-RXN:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=4.2.3.12-RXN&oldid=143080"