Difference between revisions of "4.2.3.12-RXN"

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(Created page with "Category:reaction == Reaction 2KETO-3METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating) * ec-number:...")
(Created page with "Category:reaction == Reaction 4.2.3.12-RXN == * direction: ** left-to-right * common-name: ** 6-pyruvoyl-tetrahydropterin synthase * ec-number: ** [http://enzyme.expasy.or...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2KETO-3METHYLVALERATE-RXN ==
+
== Reaction 4.2.3.12-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** (s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)
+
** 6-pyruvoyl-tetrahydropterin synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.2.1 ec-1.2.1]
+
** [http://enzyme.expasy.org/EC/4.2.3.12 ec-4.2.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[2-METHYL-BUTYRYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
+
* 1 [[DIHYDRONEOPTERIN-P3]][c] '''=>''' 1 [[6-PYRUVOYL-5678-TETRAHYDROPTERIN]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ11017]]
+
* Gene: [[SJ00075]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ18449]]
+
* Gene: [[SJ00496]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ11016]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5108]], L-isoleucine biosynthesis V:
+
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis:
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[ILEUDEG-PWY]], L-isoleucine degradation I:
+
* [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I:
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5664]]:
 +
** '''2''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR141260
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30910 30910]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22049 22049]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03171 R03171]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04286 R04286]
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
{{#set: common-name=(s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)}}
+
{{#set: common-name=6-pyruvoyl-tetrahydropterin synthase}}
{{#set: ec-number=ec-1.2.1}}
+
{{#set: ec-number=ec-4.2.3.12}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 4.2.3.12-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6-pyruvoyl-tetrahydropterin synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7442, drosopterin and aurodrosopterin biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5663, erythro-tetrahydrobiopterin biosynthesis I:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5664:
    • 2 reactions found over n.a reactions in the full pathway
  • PWY-6983, threo-tetrahydrobiopterin biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR141260
  • RHEA:
  • LIGAND-RXN: