Difference between revisions of "4.3.1.17-RXN"

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(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * direction: ** reversible * common-name: ** sulfate adenylyltransferase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction 4.3.1.17-RXN == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.17...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
+
== Reaction 4.3.1.17-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** sulfate adenylyltransferase
+
** l-serine ammonia-lyase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/4.3.1.17 ec-4.3.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09890]]
+
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
** Category: [[orthology]]
+
* Gene: [[SJ08066]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04851]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5278]], sulfite oxidation III:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6683]], assimilatory sulfate reduction III:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5340]], sulfate activation for sulfonation:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR104339
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19170 19170]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
+
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
** [http://www.uniprot.org/uniprot/O33581 O33581]
+
** [http://www.uniprot.org/uniprot/P30744 P30744]
** [http://www.uniprot.org/uniprot/O34764 O34764]
+
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
** [http://www.uniprot.org/uniprot/P56072 P56072]
** [http://www.uniprot.org/uniprot/O67174 O67174]
+
** [http://www.uniprot.org/uniprot/P25379 P25379]
** [http://www.uniprot.org/uniprot/P21156 P21156]
+
** [http://www.uniprot.org/uniprot/P16095 P16095]
** [http://www.uniprot.org/uniprot/O23324 O23324]
+
** [http://www.uniprot.org/uniprot/P20132 P20132]
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
+
** [http://www.uniprot.org/uniprot/P09367 P09367]
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
+
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
+
** [http://www.uniprot.org/uniprot/P17324 P17324]
** [http://www.uniprot.org/uniprot/P28604 P28604]
+
** [http://www.uniprot.org/uniprot/P80212 P80212]
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
+
** [http://www.uniprot.org/uniprot/P80213 P80213]
** [http://www.uniprot.org/uniprot/P23845 P23845]
+
{{#set: direction=left-to-right}}
** [http://www.uniprot.org/uniprot/O43252 O43252]
+
{{#set: common-name=l-serine ammonia-lyase}}
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
+
{{#set: ec-number=ec-4.3.1.17}}
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
** [http://www.uniprot.org/uniprot/P08536 P08536]
 
** [http://www.uniprot.org/uniprot/P74241 P74241]
 
** [http://www.uniprot.org/uniprot/O48888 O48888]
 
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
** [http://www.uniprot.org/uniprot/P13441 P13441]
 
** [http://www.uniprot.org/uniprot/P13442 P13442]
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: common-name=sulfate adenylyltransferase}}
 
{{#set: ec-number=ec-2.7.7.4}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction 4.3.1.17-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-serine ammonia-lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links