Difference between revisions of "7-ALPHA-HYDROXYSTEROID-DEH-RXN"

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(Created page with "Category:reaction == Reaction AMINOACYLASE-RXN == * direction: ** left-to-right * common-name: ** aminoacylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5...")
(Created page with "Category:reaction == Reaction RXN0-2023 == * direction: ** left-to-right * common-name: ** trna-specific 2-thiouridylase * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMINOACYLASE-RXN ==
+
== Reaction RXN0-2023 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** aminoacylase
+
** trna-specific 2-thiouridylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5.1.14]
+
** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Acylated-Aliphatic-Amino-Acids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Aliphatic-L-Amino-Acids]][c] '''+''' 1 [[Carboxylates]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[TusE-S-sulfanylcysteine]][c] '''+''' 1 [[tRNA-uridine34]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TusE-L-cysteine]][c] '''+''' 1 [[tRNA-2-thiouridine34]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09884]]
+
* Gene: [[SJ00619]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21981]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13939]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria):
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15565 15565]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01263 R01263]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q03154 Q03154]
 
−
** [http://www.uniprot.org/uniprot/Q8X8Q0 Q8X8Q0]
 
−
** [http://www.uniprot.org/uniprot/P72349 P72349]
 
−
** [http://www.uniprot.org/uniprot/P37111 P37111]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aminoacylase}}
+
{{#set: common-name=trna-specific 2-thiouridylase}}
−
{{#set: ec-number=ec-3.5.1.14}}
+
{{#set: ec-number=ec-2.8.1.13}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:25, 15 January 2021

Reaction RXN0-2023

  • direction:
    • left-to-right
  • common-name:
    • trna-specific 2-thiouridylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7892, tRNA-uridine 2-thiolation and selenation (bacteria):
    • 3 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=7-ALPHA-HYDROXYSTEROID-DEH-RXN&oldid=116136"