Difference between revisions of "7-ALPHA-HYDROXYSTEROID-DEH-RXN"

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(Created page with "Category:reaction == Reaction PSEUDOURIDINE-KINASE-RXN == * direction: ** left-to-right * common-name: ** pseudouridine kinase * ec-number: ** [http://enzyme.expasy.org/EC...")
(Created page with "Category:reaction == Reaction RXN-10039 == * direction: ** left-to-right * common-name: ** selenocysteine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.9.1.2 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction PSEUDOURIDINE-KINASE-RXN ==
+
== Reaction RXN-10039 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** pseudouridine kinase
+
** selenocysteine synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.1.83 ec-2.7.1.83]
+
** [http://enzyme.expasy.org/EC/2.9.1.2 ec-2.9.1.2]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CPD-497]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
+
* 1 [[O-phospho-L-seryl-tRNASecs]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Charged-SEC-tRNAs]][c] '''+''' 2 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ04700]]
+
* Gene: [[SJ07198]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6019]], pseudouridine degradation:
+
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22449 22449]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25042 25042]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03315 R03315]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=pseudouridine kinase}}
+
{{#set: common-name=selenocysteine synthase}}
{{#set: ec-number=ec-2.7.1.83}}
+
{{#set: ec-number=ec-2.9.1.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:05, 5 January 2021

Reaction RXN-10039

  • direction:
    • left-to-right
  • common-name:
    • selenocysteine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links