Difference between revisions of "ACETATE--COA-LIGASE-RXN"

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(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1...")
(Created page with "Category:reaction == Reaction RXN-12895 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.110 ec-3.5.1.110] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALPHAGALACTOSID-RXN ==
+
== Reaction RXN-12895 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** alpha-galactosidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
+
** [http://enzyme.expasy.org/EC/3.5.1.110 ec-3.5.1.110]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1 [[CPD-13927]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-13930]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03511]]
+
* Gene: [[SJ13434]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02145]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02144]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05258]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1301]], melibiose degradation:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR113346
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42621 42621]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09950 R09950]
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16551 P16551]
 
−
** [http://www.uniprot.org/uniprot/P27756 P27756]
 
−
** [http://www.uniprot.org/uniprot/P04824 P04824]
 
−
** [http://www.uniprot.org/uniprot/P06720 P06720]
 
−
** [http://www.uniprot.org/uniprot/P06280 P06280]
 
−
** [http://www.uniprot.org/uniprot/P51569 P51569]
 
−
** [http://www.uniprot.org/uniprot/O93816 O93816]
 
−
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
 
−
** [http://www.uniprot.org/uniprot/P14749 P14749]
 
−
** [http://www.uniprot.org/uniprot/P28351 P28351]
 
−
** [http://www.uniprot.org/uniprot/P43467 P43467]
 
−
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
 
−
** [http://www.uniprot.org/uniprot/P41945 P41945]
 
−
** [http://www.uniprot.org/uniprot/P41946 P41946]
 
−
** [http://www.uniprot.org/uniprot/P41947 P41947]
 
−
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
 
−
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
 
−
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
 
−
** [http://www.uniprot.org/uniprot/O04943 O04943]
 
−
** [http://www.uniprot.org/uniprot/O04944 O04944]
 
−
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
 
−
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
 
−
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-galactosidase}}
+
{{#set: ec-number=ec-3.5.1.110}}
−
{{#set: ec-number=ec-3.2.1.22}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction RXN-12895

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR113346
  • RHEA:
  • LIGAND-RXN:





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