Difference between revisions of "ACETATE--COA-LIGASE-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
 
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** acetate-coa ligase ** acetyl-coa synthetase (amp-forming) * ec-num...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723] ==
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== Reaction ACETATE--COA-LIGASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
 
* common-name:
 
* common-name:
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** trehalose degradation v
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** acetate-coa ligase
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== Reaction(s) found ==
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** acetyl-coa synthetase (amp-forming)
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* [[GLUCOKIN-RXN]]
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* ec-number:
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* [[PHOSPHOGLUCMUT-RXN]]
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** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4441 RXN-4441]
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* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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{{#set: taxonomic-range=tax-4751}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=trehalose degradation v}}
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* Gene: [[SJ08601]]
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{{#set: nb reaction found=2}}
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** Category: [[annotation]]
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{{#set: completion rate=0.67}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=3}}
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ16901]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Pathway(s) ==
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* [[PWY66-161]], ethanol degradation III:
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7118]], chitin deacetylation:
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[PWY66-162]], ethanol degradation IV:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1313]], acetate conversion to acetyl-CoA:
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6672]], cis-geranyl-CoA degradation:
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY66-21]], ethanol degradation II:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR95413
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P27095 P27095]
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** [http://www.uniprot.org/uniprot/P31638 P31638]
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** [http://www.uniprot.org/uniprot/Q12662 Q12662]
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** [http://www.uniprot.org/uniprot/P28812 P28812]
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** [http://www.uniprot.org/uniprot/P27550 P27550]
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** [http://www.uniprot.org/uniprot/O34613 O34613]
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** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
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** [http://www.uniprot.org/uniprot/P36333 P36333]
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** [http://www.uniprot.org/uniprot/Q01574 Q01574]
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** [http://www.uniprot.org/uniprot/P39062 P39062]
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** [http://www.uniprot.org/uniprot/Q01576 Q01576]
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** [http://www.uniprot.org/uniprot/P52910 P52910]
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** [http://www.uniprot.org/uniprot/Q55404 Q55404]
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** [http://www.uniprot.org/uniprot/P16928 P16928]
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** [http://www.uniprot.org/uniprot/P16929 P16929]
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** [http://www.uniprot.org/uniprot/O68040 O68040]
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** [http://www.uniprot.org/uniprot/P78773 P78773]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=acetate-coa ligase|acetyl-coa synthetase (amp-forming)}}
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{{#set: ec-number=ec-6.2.1.1}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=6}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction ACETATE--COA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • acetate-coa ligase
    • acetyl-coa synthetase (amp-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-161, ethanol degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 5 reactions found over 4 reactions in the full pathway
  • PWY66-162, ethanol degradation IV:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672, cis-geranyl-CoA degradation:
    • 4 reactions found over 9 reactions in the full pathway
  • PWY66-21, ethanol degradation II:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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