Difference between revisions of "ACONITATEDEHYDR-RXN"

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(Created page with "Category:reaction == Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** 10-formyltetrahydrofolate:l-methionyl-trnafmet n-form...")
(Created page with "Category:reaction == Reaction RNA-DIRECTED-RNA-POLYMERASE-RXN == * direction: ** reversible * common-name: ** rna-directed 5'-3' rna polymerase * ec-number: ** [http://enz...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN ==
+
== Reaction RNA-DIRECTED-RNA-POLYMERASE-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** 10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase
+
** rna-directed 5'-3' rna polymerase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9]
+
** [http://enzyme.expasy.org/EC/2.7.7.48 ec-2.7.7.48]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[Nucleoside-Triphosphates]][c] '''+''' 1 [[RNA-Holder]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[RNA-Holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18164]]
+
* Gene: [[SJ15156]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20866]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03546]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06734]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15148]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 20: Line 32:
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00444 R00444]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P94463 P94463]
+
** [http://www.uniprot.org/uniprot/P08545 P08545]
** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
+
** [http://www.uniprot.org/uniprot/P12723 P12723]
** [http://www.uniprot.org/uniprot/P50932 P50932]
+
** [http://www.uniprot.org/uniprot/Q83496 Q83496]
** [http://www.uniprot.org/uniprot/P47605 P47605]
+
** [http://www.uniprot.org/uniprot/P16342 P16342]
** [http://www.uniprot.org/uniprot/P44787 P44787]
+
** [http://www.uniprot.org/uniprot/P26627 P26627]
** [http://www.uniprot.org/uniprot/P56461 P56461]
+
** [http://www.uniprot.org/uniprot/Q04561 Q04561]
** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
+
** [http://www.uniprot.org/uniprot/Q07048 Q07048]
** [http://www.uniprot.org/uniprot/O51091 O51091]
+
** [http://www.uniprot.org/uniprot/Q7M006 Q7M006]
** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
+
** [http://www.uniprot.org/uniprot/Q66339 Q66339]
** [http://www.uniprot.org/uniprot/P23882 P23882]
+
** [http://www.uniprot.org/uniprot/P27408 P27408]
** [http://www.uniprot.org/uniprot/P32785 P32785]
+
** [http://www.uniprot.org/uniprot/P25328 P25328]
** [http://www.uniprot.org/uniprot/P75235 P75235]
+
** [http://www.uniprot.org/uniprot/P30929 P30929]
** [http://www.uniprot.org/uniprot/Q55163 Q55163]
+
** [http://www.uniprot.org/uniprot/Q02119 Q02119]
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P18457 P18457]
{{#set: common-name=10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase}}
+
** [http://www.uniprot.org/uniprot/P36309 P36309]
{{#set: ec-number=ec-2.1.2.9}}
+
** [http://www.uniprot.org/uniprot/Q03495 Q03495]
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P36312 P36312]
 +
** [http://www.uniprot.org/uniprot/P27738 P27738]
 +
** [http://www.uniprot.org/uniprot/P24658 P24658]
 +
** [http://www.uniprot.org/uniprot/P16379 P16379]
 +
** [http://www.uniprot.org/uniprot/P15402 P15402]
 +
** [http://www.uniprot.org/uniprot/P36290 P36290]
 +
** [http://www.uniprot.org/uniprot/P22956 P22956]
 +
** [http://www.uniprot.org/uniprot/P12577 P12577]
 +
** [http://www.uniprot.org/uniprot/Q82451 Q82451]
 +
** [http://www.uniprot.org/uniprot/P31345 P31345]
 +
** [http://www.uniprot.org/uniprot/Q02382 Q02382]
 +
** [http://www.uniprot.org/uniprot/Q67726 Q67726]
 +
** [http://www.uniprot.org/uniprot/Q9IFX2 Q9IFX2]
 +
** [http://www.uniprot.org/uniprot/P35975 P35975]
 +
** [http://www.uniprot.org/uniprot/P04517 P04517]
 +
** [http://www.uniprot.org/uniprot/P03300 P03300]
 +
** [http://www.uniprot.org/uniprot/P22055 P22055]
 +
** [http://www.uniprot.org/uniprot/P06209 P06209]
 +
** [http://www.uniprot.org/uniprot/P23069 P23069]
 +
** [http://www.uniprot.org/uniprot/P06210 P06210]
 +
** [http://www.uniprot.org/uniprot/P21404 P21404]
 +
** [http://www.uniprot.org/uniprot/P08291 P08291]
 +
** [http://www.uniprot.org/uniprot/P03313 P03313]
 +
** [http://www.uniprot.org/uniprot/Q86530 Q86530]
 +
** [http://www.uniprot.org/uniprot/P12915 P12915]
 +
** [http://www.uniprot.org/uniprot/P03304 P03304]
 +
** [http://www.uniprot.org/uniprot/P32537 P32537]
 +
** [http://www.uniprot.org/uniprot/P17593 P17593]
 +
** [http://www.uniprot.org/uniprot/P29813 P29813]
 +
** [http://www.uniprot.org/uniprot/P17594 P17594]
 +
** [http://www.uniprot.org/uniprot/P04936 P04936]
 +
** [http://www.uniprot.org/uniprot/P08617 P08617]
 +
** [http://www.uniprot.org/uniprot/P06441 P06441]
 +
** [http://www.uniprot.org/uniprot/P16604 P16604]
 +
** [http://www.uniprot.org/uniprot/P29152 P29152]
 +
** [http://www.uniprot.org/uniprot/P29149 P29149]
 +
** [http://www.uniprot.org/uniprot/P18522 P18522]
 +
** [http://www.uniprot.org/uniprot/P03600 P03600]
 +
** [http://www.uniprot.org/uniprot/Q83328 Q83328]
 +
** [http://www.uniprot.org/uniprot/Q9PYF1 Q9PYF1]
 +
** [http://www.uniprot.org/uniprot/P36304 P36304]
 +
** [http://www.uniprot.org/uniprot/P37987 P37987]
 +
** [http://www.uniprot.org/uniprot/P22168 P22168]
 +
** [http://www.uniprot.org/uniprot/Q03396 Q03396]
 +
** [http://www.uniprot.org/uniprot/Q04574 Q04574]
 +
** [http://www.uniprot.org/uniprot/P35928 P35928]
 +
** [http://www.uniprot.org/uniprot/P33453 P33453]
 +
** [http://www.uniprot.org/uniprot/P35930 P35930]
 +
** [http://www.uniprot.org/uniprot/Q90069 Q90069]
 +
** [http://www.uniprot.org/uniprot/Q9IBP2 Q9IBP2]
 +
** [http://www.uniprot.org/uniprot/Q04575 Q04575]
 +
** [http://www.uniprot.org/uniprot/P35341 P35341]
 +
** [http://www.uniprot.org/uniprot/Q02941 Q02941]
 +
** [http://www.uniprot.org/uniprot/Q01206 Q01206]
 +
** [http://www.uniprot.org/uniprot/Q03053 Q03053]
 +
** [http://www.uniprot.org/uniprot/Q86632 Q86632]
 +
** [http://www.uniprot.org/uniprot/Q86656 Q86656]
 +
** [http://www.uniprot.org/uniprot/Q8QY00 Q8QY00]
 +
** [http://www.uniprot.org/uniprot/Q8QY01 Q8QY01]
 +
** [http://www.uniprot.org/uniprot/Q99A77 Q99A77]
 +
** [http://www.uniprot.org/uniprot/Q7LZX1 Q7LZX1]
 +
** [http://www.uniprot.org/uniprot/P29324 P29324]
 +
** [http://www.uniprot.org/uniprot/P03430 P03430]
 +
** [http://www.uniprot.org/uniprot/P03431 P03431]
 +
** [http://www.uniprot.org/uniprot/P19703 P19703]
 +
** [http://www.uniprot.org/uniprot/P03432 P03432]
 +
** [http://www.uniprot.org/uniprot/P13871 P13871]
 +
** [http://www.uniprot.org/uniprot/P07832 P07832]
 +
** [http://www.uniprot.org/uniprot/P13872 P13872]
 +
** [http://www.uniprot.org/uniprot/P27153 P27153]
 +
** [http://www.uniprot.org/uniprot/P13878 P13878]
 +
** [http://www.uniprot.org/uniprot/P03434 P03434]
 +
** [http://www.uniprot.org/uniprot/P13873 P13873]
 +
** [http://www.uniprot.org/uniprot/P11136 P11136]
 +
** [http://www.uniprot.org/uniprot/P13874 P13874]
 +
** [http://www.uniprot.org/uniprot/P27194 P27194]
 +
** [http://www.uniprot.org/uniprot/P12445 P12445]
 +
** [http://www.uniprot.org/uniprot/P13877 P13877]
 +
** [http://www.uniprot.org/uniprot/P03429 P03429]
 +
** [http://www.uniprot.org/uniprot/P18884 P18884]
 +
** [http://www.uniprot.org/uniprot/P13875 P13875]
 +
** [http://www.uniprot.org/uniprot/P13876 P13876]
 +
** [http://www.uniprot.org/uniprot/P17965 P17965]
 +
** [http://www.uniprot.org/uniprot/Q80873 Q80873]
 +
** [http://www.uniprot.org/uniprot/Q89335 Q89335]
 +
** [http://www.uniprot.org/uniprot/Q67293 Q67293]
 +
** [http://www.uniprot.org/uniprot/Q67303 Q67303]
 +
** [http://www.uniprot.org/uniprot/Q7M023 Q7M023]
 +
** [http://www.uniprot.org/uniprot/P07393 P07393]
 +
** [http://www.uniprot.org/uniprot/P00585 P00585]
 +
** [http://www.uniprot.org/uniprot/P14647 P14647]
 +
** [http://www.uniprot.org/uniprot/P21405 P21405]
 +
** [http://www.uniprot.org/uniprot/P19751 P19751]
 +
** [http://www.uniprot.org/uniprot/P31352 P31352]
 +
** [http://www.uniprot.org/uniprot/P28887 P28887]
 +
** [http://www.uniprot.org/uniprot/P11205 P11205]
 +
** [http://www.uniprot.org/uniprot/P04518 P04518]
 +
** [http://www.uniprot.org/uniprot/P17460 P17460]
 +
** [http://www.uniprot.org/uniprot/P15187 P15187]
 +
** [http://www.uniprot.org/uniprot/Q9WJD6 Q9WJD6]
 +
** [http://www.uniprot.org/uniprot/P15962 P15962]
 +
** [http://www.uniprot.org/uniprot/P29044 P29044]
 +
** [http://www.uniprot.org/uniprot/Q65876 Q65876]
 +
** [http://www.uniprot.org/uniprot/P29045 P29045]
 +
** [http://www.uniprot.org/uniprot/P09507 P09507]
 +
** [http://www.uniprot.org/uniprot/P17520 P17520]
 +
** [http://www.uniprot.org/uniprot/P11623 P11623]
 +
** [http://www.uniprot.org/uniprot/P20470 P20470]
 +
** [http://www.uniprot.org/uniprot/P27176 P27176]
 +
** [http://www.uniprot.org/uniprot/P28976 P28976]
 +
** [http://www.uniprot.org/uniprot/P15095 P15095]
 +
** [http://www.uniprot.org/uniprot/P28897 P28897]
 +
** [http://www.uniprot.org/uniprot/P20128 P20128]
 +
** [http://www.uniprot.org/uniprot/P20127 P20127]
 +
** [http://www.uniprot.org/uniprot/P27209 P27209]
 +
** [http://www.uniprot.org/uniprot/P22958 P22958]
 +
** [http://www.uniprot.org/uniprot/P19811 P19811]
 +
** [http://www.uniprot.org/uniprot/P27409 P27409]
 +
** [http://www.uniprot.org/uniprot/P27410 P27410]
 +
** [http://www.uniprot.org/uniprot/P29154 P29154]
 +
** [http://www.uniprot.org/uniprot/P14240 P14240]
 +
** [http://www.uniprot.org/uniprot/P20430 P20430]
 +
** [http://www.uniprot.org/uniprot/P13840 P13840]
 +
** [http://www.uniprot.org/uniprot/P31817 P31817]
 +
** [http://www.uniprot.org/uniprot/P12918 P12918]
 +
** [http://www.uniprot.org/uniprot/P22173 P22173]
 +
** [http://www.uniprot.org/uniprot/P22174 P22174]
 +
** [http://www.uniprot.org/uniprot/P05080 P05080]
 +
** [http://www.uniprot.org/uniprot/P09675 P09675]
 +
** [http://www.uniprot.org/uniprot/Q9JA04 Q9JA04]
 +
** [http://www.uniprot.org/uniprot/Q9JA03 Q9JA03]
 +
** [http://www.uniprot.org/uniprot/Q84792 Q84792]
 +
** [http://www.uniprot.org/uniprot/P13025 P13025]
 +
** [http://www.uniprot.org/uniprot/P18882 P18882]
 +
** [http://www.uniprot.org/uniprot/P12444 P12444]
 +
** [http://www.uniprot.org/uniprot/P15965 P15965]
 +
** [http://www.uniprot.org/uniprot/Q98595 Q98595]
 +
** [http://www.uniprot.org/uniprot/Q85257 Q85257]
 +
** [http://www.uniprot.org/uniprot/P09674 P09674]
 +
** [http://www.uniprot.org/uniprot/Q9MBL0 Q9MBL0]
 +
** [http://www.uniprot.org/uniprot/P27314 P27314]
 +
** [http://www.uniprot.org/uniprot/P27316 P27316]
 +
** [http://www.uniprot.org/uniprot/Q84851 Q84851]
 +
** [http://www.uniprot.org/uniprot/Q85115 Q85115]
 +
** [http://www.uniprot.org/uniprot/Q04158 Q04158]
 +
** [http://www.uniprot.org/uniprot/Q89234 Q89234]
 +
** [http://www.uniprot.org/uniprot/P37800 P37800]
 +
** [http://www.uniprot.org/uniprot/Q05912 Q05912]
 +
** [http://www.uniprot.org/uniprot/P49303 P49303]
 +
** [http://www.uniprot.org/uniprot/P35262 P35262]
 +
** [http://www.uniprot.org/uniprot/P41357 P41357]
 +
** [http://www.uniprot.org/uniprot/Q66101 Q66101]
 +
** [http://www.uniprot.org/uniprot/Q67433 Q67433]
 +
** [http://www.uniprot.org/uniprot/Q83097 Q83097]
 +
** [http://www.uniprot.org/uniprot/Q83074 Q83074]
 +
** [http://www.uniprot.org/uniprot/Q66292 Q66292]
 +
** [http://www.uniprot.org/uniprot/Q66220 Q66220]
 +
** [http://www.uniprot.org/uniprot/P31999 P31999]
 +
** [http://www.uniprot.org/uniprot/Q90153 Q90153]
 +
** [http://www.uniprot.org/uniprot/P23172 P23172]
 +
** [http://www.uniprot.org/uniprot/O89163 O89163]
 +
** [http://www.uniprot.org/uniprot/O82504 O82504]
 +
** [http://www.uniprot.org/uniprot/O37086 O37086]
 +
** [http://www.uniprot.org/uniprot/O89344 O89344]
 +
** [http://www.uniprot.org/uniprot/P27407 P27407]
 +
** [http://www.uniprot.org/uniprot/O14227 O14227]
 +
** [http://www.uniprot.org/uniprot/Q9ZR58 Q9ZR58]
 +
** [http://www.uniprot.org/uniprot/P27920 P27920]
 +
** [http://www.uniprot.org/uniprot/P17779 P17779]
 +
** [http://www.uniprot.org/uniprot/P12576 P12576]
 +
** [http://www.uniprot.org/uniprot/P06829 P06829]
 +
** [http://www.uniprot.org/uniprot/P06447 P06447]
 +
** [http://www.uniprot.org/uniprot/P03523 P03523]
 +
** [http://www.uniprot.org/uniprot/P13615 P13615]
 +
** [http://www.uniprot.org/uniprot/P11213 P11213]
 +
** [http://www.uniprot.org/uniprot/P16289 P16289]
 +
** [http://www.uniprot.org/uniprot/P31332 P31332]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=rna-directed 5'-3' rna polymerase}}
 +
{{#set: ec-number=ec-2.7.7.48}}
 +
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 15:38, 5 January 2021

Reaction RNA-DIRECTED-RNA-POLYMERASE-RXN

  • direction:
    • reversible
  • common-name:
    • rna-directed 5'-3' rna polymerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links