Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-6883 == * direction: ** left-to-right * common-name: ** ubiquinol:oxygen oxidoreductase * ec-number: ** [http://enzyme.expasy.org/EC/1.10...")
(Created page with "Category:reaction == Reaction DTDPDEHYRHAMREDUCT-RXN == * direction: ** left-to-right * common-name: ** dtdp-4-dehydrorhamnose reductase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-6883 ==
+
== Reaction DTDPDEHYRHAMREDUCT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** ubiquinol:oxygen oxidoreductase
+
** dtdp-4-dehydrorhamnose reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.10.3.11 ec-1.10.3.11]
+
** [http://enzyme.expasy.org/EC/1.1.1.133 ec-1.1.1.133]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Ubiquinols]][c] '''=>''' 2 [[Ubiquinones]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DTDP-RHAMNOSE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08130]]
+
* Gene: [[SJ22556]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ12321]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00758]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway):
+
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258]
+
** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
 +
** [http://www.uniprot.org/uniprot/P37760 P37760]
 +
** [http://www.uniprot.org/uniprot/Q46769 Q46769]
 +
** [http://www.uniprot.org/uniprot/O33664 O33664]
 +
** [http://www.uniprot.org/uniprot/O66251 O66251]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ubiquinol:oxygen oxidoreductase}}
+
{{#set: common-name=dtdp-4-dehydrorhamnose reductase}}
−
{{#set: ec-number=ec-1.10.3.11}}
+
{{#set: ec-number=ec-1.1.1.133}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:25, 15 January 2021

Reaction DTDPDEHYRHAMREDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • dtdp-4-dehydrorhamnose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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