Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...")
 
(Created page with "Category:reaction == Reaction AICARSYN-RXN == * direction: ** reversible * common-name: ** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase * ec-number: *...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823] ==
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== Reaction AICARSYN-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
 
* common-name:
 
* common-name:
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** molybdenum cofactor biosynthesis
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** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-11361]]
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** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
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* [[RXN-12473]]
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== Reaction formula ==
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* [[RXN-17809]]
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* 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[AICAR]][c] '''+''' 1 [[FUM]][c]
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* [[RXN-8340]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-8344]]
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* Gene: [[SJ06544]]
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* [[RXN-8348]]
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** Category: [[annotation]]
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* [[RXN0-308]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) not found ==
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8342 RXN-8342]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: taxonomic-range=tax-2|tax-2157|tax-2759}}
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== Pathway(s)  ==
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{{#set: common-name=molybdenum cofactor biosynthesis}}
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
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{{#set: nb reaction found=7}}
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** '''4''' reactions found over '''6''' reactions in the full pathway
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{{#set: completion rate=0.88}}
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
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{{#set: nb total reaction=8}}
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR108966
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23923 23923]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21265 P21265]
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** [http://www.uniprot.org/uniprot/Q58339 Q58339]
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** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
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** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
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** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
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** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
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** [http://www.uniprot.org/uniprot/O65180 O65180]
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** [http://www.uniprot.org/uniprot/P12047 P12047]
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{{#set: direction=reversible}}
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{{#set: common-name=5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase}}
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{{#set: ec-number=ec-4.3.2.2}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction AICARSYN-RXN

  • direction:
    • reversible
  • common-name:
    • 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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