Difference between revisions of "AICARSYN-RXN"

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(Created page with "Category:reaction == Reaction ERYTHRULOSE-REDUCTASE-RXN == * direction: ** reversible * common-name: ** erythrulose reductase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction GTP-CYCLOHYDRO-I-RXN == * direction: ** left-to-right * common-name: ** gtp cyclohydrolase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ERYTHRULOSE-REDUCTASE-RXN ==
+
== Reaction GTP-CYCLOHYDRO-I-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** erythrulose reductase
+
** gtp cyclohydrolase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.403 ec-1.1.1.403]
+
** [http://enzyme.expasy.org/EC/3.5.4.16 ec-3.5.4.16]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12825]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[D-ERYTHRULOSE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ12149]]
+
* Gene: [[SJ00877]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ15785]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7786]], D-threitol degradation:
+
* [[PWY0-1433]], tetrahydromonapterin biosynthesis:
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6703]], preQ0 biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7852]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5664]], erythro-tetrahydrobiopterin biosynthesis II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18005 18005]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17473 17473]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R08573 R08573]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00424 R00424]
{{#set: direction=reversible}}
+
* UNIPROT:
{{#set: common-name=erythrulose reductase}}
+
** [http://www.uniprot.org/uniprot/P19465 P19465]
{{#set: ec-number=ec-1.1.1.403}}
+
** [http://www.uniprot.org/uniprot/P22288 P22288]
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/P43866 P43866]
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/P51594 P51594]
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P64207 P64207]
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9CGE3 Q9CGE3]
 +
** [http://www.uniprot.org/uniprot/O66603 O66603]
 +
** [http://www.uniprot.org/uniprot/P56462 P56462]
 +
** [http://www.uniprot.org/uniprot/P0A6T5 P0A6T5]
 +
** [http://www.uniprot.org/uniprot/P50141 P50141]
 +
** [http://www.uniprot.org/uniprot/P30793 P30793]
 +
** [http://www.uniprot.org/uniprot/P51601 P51601]
 +
** [http://www.uniprot.org/uniprot/Q05915 Q05915]
 +
** [http://www.uniprot.org/uniprot/P51597 P51597]
 +
** [http://www.uniprot.org/uniprot/P51600 P51600]
 +
** [http://www.uniprot.org/uniprot/Q94465 Q94465]
 +
** [http://www.uniprot.org/uniprot/Q55759 Q55759]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=gtp cyclohydrolase}}
 +
{{#set: ec-number=ec-3.5.4.16}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=8}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:36, 5 January 2021

Reaction GTP-CYCLOHYDRO-I-RXN

  • direction:
    • left-to-right
  • common-name:
    • gtp cyclohydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1433, tetrahydromonapterin biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7442, drosopterin and aurodrosopterin biosynthesis:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6703, preQ0 biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7852, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5664, erythro-tetrahydrobiopterin biosynthesis II:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6983, threo-tetrahydrobiopterin biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5663, erythro-tetrahydrobiopterin biosynthesis I:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links