Difference between revisions of "AKGDHe2r"

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(Created page with "Category:reaction == Reaction RXN-1143 == * direction: ** left-to-right * common-name: ** caffeate o-methyltransferase ** 5-hydroxy coniferaldehyde o-methyltransferase * e...")
(Created page with "Category:reaction == Reaction TransportSeed-EDTA == * direction: ** left-to-right == Reaction formula == * 1.0 EDTA[e] '''=>''' 1.0 EDTA[c] == Gene(s) associated w...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-1143 ==
+
== Reaction TransportSeed-EDTA ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** caffeate o-methyltransferase
 
** 5-hydroxy coniferaldehyde o-methyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.68 ec-2.1.1.68]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
+
* 1.0 [[EDTA]][e] '''=>''' 1.0 [[EDTA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ09797]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ17434]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07699]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-361]], phenylpropanoid biosynthesis:
 
** '''7''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-5168]], ferulate and sinapate biosynthesis:
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=caffeate o-methyltransferase|5-hydroxy coniferaldehyde o-methyltransferase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.1.1.68}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=3}}
+
{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 13:20, 14 January 2021

Reaction TransportSeed-EDTA

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links