Difference between revisions of "ALANINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction HEMN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.98.3 ec-1.3.98.3] == Reaction formula == * 1 COP...")
(Created page with "Category:reaction == Reaction RXN-7931 == * direction: ** reversible * common-name: ** δ3,δ2-enoyl-coa isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HEMN-RXN ==
+
== Reaction RXN-7931 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 +
* common-name:
 +
** δ3,δ2-enoyl-coa isomerase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.98.3 ec-1.3.98.3]
+
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c]
+
* 1 [[CPD-7221]][c] '''<=>''' 1 [[CPD-7222]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05457]]
+
* Gene: [[SJ07211]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* Gene: [[SJ11169]]
* Gene: [[SJ16512]]
+
** Category: [[annotation]]
** Category: [[orthology]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06609]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03663]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ20556]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[HEMESYN2-PWY]], heme b biosynthesis II (oxygen-independent):
+
* [[PWY-7291]], oleate &beta;-oxidation (isomerase-dependent, yeast):
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic):
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15426 15426]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23719 23719]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R06895 R06895]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04100 R04100]
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
{{#set: ec-number=ec-1.3.98.3}}
+
{{#set: common-name=&delta;3,&delta;2-enoyl-coa isomerase}}
{{#set: nb gene associated=5}}
+
{{#set: ec-number=ec-5.3.3.8}}
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=2}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:00, 14 January 2021

Reaction RXN-7931

  • direction:
    • reversible
  • common-name:
    • δ3,δ2-enoyl-coa isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7291, oleate β-oxidation (isomerase-dependent, yeast):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links