Difference between revisions of "ALDOSE-1-EPIMERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
(Created page with "Category:reaction == Reaction ALDOSE-1-EPIMERASE-RXN == * direction: ** reversible * common-name: ** aldose 1-epimerase * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3....")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8642 ==
+
== Reaction ALDOSE-1-EPIMERASE-RXN ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** nadp-dependent isocitrate dehydrogenase
+
** aldose 1-epimerase
−
* synonymous:
+
* ec-number:
−
** idp
+
** [http://enzyme.expasy.org/EC/5.1.3.3 ec-5.1.3.3]
−
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
−
** idp1
 
−
** isocitrate (nadp) dehydrogenase
 
−
** nadp+-icdh
 
−
** nadp isocitric dehydrogenase
 
−
** idp2
 
−
** nadp+-linked isocitrate dehydrogenase
 
−
** nadp-linked isocitrate dehydrogenase
 
−
** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
−
** nadp-specific isocitrate dehydrogenase
 
−
** nadp-dependent isocitric dehydrogenase
 
−
** dual-cofactor-specific isocitrate dehydrogenase
 
−
** idh (ambiguous)
 
−
** isocitrate dehydrogenase (nadp-dependent)
 
−
** idp3
 
−
** nadp+-idh
 
−
** oxalsuccinic decarboxylase
 
−
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[ALPHA-GLUCOSE]][c] '''<=>''' 1 [[GLC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08749]]
+
* Gene: [[SJ17177]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1466]], trehalose degradation VI (periplasmic):
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107082
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10264 10264]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01602 R01602]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P05149 P05149]
 +
** [http://www.uniprot.org/uniprot/Q8X8E4 Q8X8E4]
 +
** [http://www.uniprot.org/uniprot/P21955 P21955]
 +
** [http://www.uniprot.org/uniprot/P31765 P31765]
 +
** [http://www.uniprot.org/uniprot/Q9CFG9 Q9CFG9]
 +
** [http://www.uniprot.org/uniprot/P0A9C3 P0A9C3]
 +
** [http://www.uniprot.org/uniprot/Q9JSW7 Q9JSW7]
 +
** [http://www.uniprot.org/uniprot/Q9WYB8 Q9WYB8]
 +
** [http://www.uniprot.org/uniprot/Q9CE62 Q9CE62]
 +
** [http://www.uniprot.org/uniprot/Q7M2P6 Q7M2P6]
 +
** [http://www.uniprot.org/uniprot/O48971 O48971]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
+
{{#set: common-name=aldose 1-epimerase}}
−
{{#set: synonymous=nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp2|nadp-specific isocitrate dehydrogenase|nadp+-icdh|idp|nadp+-idh|nadp isocitric dehydrogenase|idp1|isocitrate (nadp) dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp3|nadp+-linked isocitrate dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|dual-cofactor-specific isocitrate dehydrogenase|idh (ambiguous)|oxalsuccinic decarboxylase}}
+
{{#set: ec-number=ec-5.1.3.3}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction ALDOSE-1-EPIMERASE-RXN

  • direction:
    • reversible
  • common-name:
    • aldose 1-epimerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1466, trehalose degradation VI (periplasmic):
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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