Difference between revisions of "ALDOSE-1-EPIMERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14812 RXN-14812] == * direction: ** reversible == Reaction formula == * 1 CPD-15709[c] '''<...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * direction: ** reversible * common-name: ** aminomethyltransferase * ec-numb...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14812 RXN-14812] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 +
* common-name:
 +
** aminomethyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1.2.10]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-15709]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
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* 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ16345]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19914]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08557]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
 +
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P25285 P25285]
 +
** [http://www.uniprot.org/uniprot/P28337 P28337]
 +
** [http://www.uniprot.org/uniprot/P27248 P27248]
 +
** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
 +
** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
 +
** [http://www.uniprot.org/uniprot/P48728 P48728]
 +
** [http://www.uniprot.org/uniprot/P49364 P49364]
 +
** [http://www.uniprot.org/uniprot/P49095 P49095]
 +
** [http://www.uniprot.org/uniprot/P49363 P49363]
 +
** [http://www.uniprot.org/uniprot/P54260 P54260]
 +
** [http://www.uniprot.org/uniprot/P49361 P49361]
 +
** [http://www.uniprot.org/uniprot/P49362 P49362]
 +
** [http://www.uniprot.org/uniprot/O49954 O49954]
 +
** [http://www.uniprot.org/uniprot/P93256 P93256]
 +
** [http://www.uniprot.org/uniprot/O32955 O32955]
 +
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: nb gene associated=0}}
+
{{#set: common-name=aminomethyltransferase}}
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-2.1.2.10}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb gene associated=3}}
{{#set: reconstruction tool=meneco}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:32, 27 August 2019

Reaction GCVT-RXN

  • direction:
    • reversible
  • common-name:
    • aminomethyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links