Difference between revisions of "ALPHA-TOCOPHEROL"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydroge...")
(Created page with "Category:metabolite == Metabolite SORBITOL == * common-name: ** d-sorbitol * smiles: ** c(c(c(c(c(co)o)o)o)o)o * inchi-key: ** fbpfztcfmrresa-jgwlitmvsa-n * molecular-weig...")
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[[Category:reaction]]
+
[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] ==
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== Metabolite SORBITOL ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** 3-hydroxyacyl-coa dehydrogenase
+
** d-sorbitol
** (s)-3-hydroxydecanoyl-coa dehydrogenase
+
* smiles:
* ec-number:
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** c(c(c(c(c(co)o)o)o)o)o
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
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* inchi-key:
== Reaction formula ==
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** fbpfztcfmrresa-jgwlitmvsa-n
* 1 [[CPD0-2244]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD0-2123]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* molecular-weight:
== Gene(s) associated with this reaction  ==
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** 182.173
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to consume the compound ==
* Gene: [[SJ01444]]
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* [[RXN-7644]]
** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-7644]]
* Gene: [[SJ03584]]
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* [[SBTD_D2]]
** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=d-sorbitol}}
** Category: [[orthology]]
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{{#set: inchi-key=inchikey=fbpfztcfmrresa-jgwlitmvsa-n}}
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
{{#set: molecular-weight=182.173}}
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ16180]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ16470]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ21390]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ17348]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ06127]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
== Pathway(s) ==
 
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31188 31188]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04743 R04743]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase|(s)-3-hydroxydecanoyl-coa dehydrogenase}}
 
{{#set: ec-number=ec-1.1.1.35}}
 
{{#set: nb gene associated=8}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
 

Revision as of 20:36, 18 December 2020

Metabolite SORBITOL

  • common-name:
    • d-sorbitol
  • smiles:
    • c(c(c(c(c(co)o)o)o)o)o
  • inchi-key:
    • fbpfztcfmrresa-jgwlitmvsa-n
  • molecular-weight:
    • 182.173

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality