Difference between revisions of "APIGNAR-RXN"

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(Created page with "Category:reaction == Reaction RXN-12243 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15-cis phytoene desaturase * synonymous: ** plant-...")
(Created page with "Category:reaction == Reaction ATDAM == * direction: ** left-to-right * common-name: ** atp:damp phosphotransferase == Reaction formula == * 1.0 ATP[c] '''+''' 1.0 DA...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12243 ==
+
== Reaction ATDAM ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 15-cis-phytoene desaturase
+
** atp:damp phosphotransferase
** 15-cis phytoene desaturase
 
* synonymous:
 
** plant-type phytoene desaturase
 
** pds
 
** phytoene desaturase (ambiguous)
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12321]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-13171]][c] '''+''' 1 [[Plastoquinols]][c]
+
* 1.0 [[ATP]][c] '''+''' 1.0 [[DAMP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[DADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ08891]]
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* Gene: [[SJ14895]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30194 30194]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R09653 R09653]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=15-cis-phytoene desaturase|15-cis phytoene desaturase}}
+
{{#set: common-name=atp:damp phosphotransferase}}
{{#set: synonymous=pds|plant-type phytoene desaturase|phytoene desaturase (ambiguous)}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 11:27, 15 January 2021

Reaction ATDAM

  • direction:
    • left-to-right
  • common-name:
    • atp:damp phosphotransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links