Difference between revisions of "ARGSUCCINLYA-RXN"

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(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * direction: ** reversible * common-name: ** aspartate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7...")
(Created page with "Category:reaction == Reaction ARGSUCCINLYA-RXN == * direction: ** reversible * common-name: ** argininosuccinate lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.1...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPARTATEKIN-RXN ==
+
== Reaction ARGSUCCINLYA-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** aspartate kinase
+
** argininosuccinate lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
+
** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
+
* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09366]]
+
* Gene: [[SJ20639]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06433]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ22223]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 22: Line 16:
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10093]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI:
+
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6559]], spermidine biosynthesis II:
+
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[P101-PWY]], ectoine biosynthesis:
+
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2941]], L-lysine biosynthesis II:
+
* [[PWY-4984]], urea cycle:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2942]], L-lysine biosynthesis III:
+
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6562]], norspermidine biosynthesis:
+
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7153]], grixazone biosynthesis:
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR96085
+
* METANETX-RXN : MNXR138059
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08495 P08495]
+
** [http://www.uniprot.org/uniprot/P50987 P50987]
−
** [http://www.uniprot.org/uniprot/P44505 P44505]
+
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
−
** [http://www.uniprot.org/uniprot/P27725 P27725]
+
** [http://www.uniprot.org/uniprot/P11447 P11447]
−
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
+
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
−
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
+
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
−
** [http://www.uniprot.org/uniprot/P00561 P00561]
+
** [http://www.uniprot.org/uniprot/P44314 P44314]
−
** [http://www.uniprot.org/uniprot/P00562 P00562]
+
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
−
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
+
** [http://www.uniprot.org/uniprot/P33110 P33110]
−
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
+
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
−
** [http://www.uniprot.org/uniprot/P53553 P53553]
+
** [http://www.uniprot.org/uniprot/P40369 P40369]
−
** [http://www.uniprot.org/uniprot/P10869 P10869]
+
** [http://www.uniprot.org/uniprot/P50988 P50988]
−
** [http://www.uniprot.org/uniprot/P08660 P08660]
+
** [http://www.uniprot.org/uniprot/P73257 P73257]
−
** [http://www.uniprot.org/uniprot/P26512 P26512]
+
** [http://www.uniprot.org/uniprot/P50514 P50514]
−
** [http://www.uniprot.org/uniprot/P37142 P37142]
+
** [http://www.uniprot.org/uniprot/P04076 P04076]
−
** [http://www.uniprot.org/uniprot/P41403 P41403]
+
** [http://www.uniprot.org/uniprot/P04424 P04424]
−
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
+
** [http://www.uniprot.org/uniprot/P20673 P20673]
−
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
−
** [http://www.uniprot.org/uniprot/P49079 P49079]
 
−
** [http://www.uniprot.org/uniprot/P49080 P49080]
 
−
** [http://www.uniprot.org/uniprot/P93402 P93402]
 
−
** [http://www.uniprot.org/uniprot/O81852 O81852]
 
−
** [http://www.uniprot.org/uniprot/O63067 O63067]
 
−
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
 
</div>
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=aspartate kinase}}
+
{{#set: common-name=argininosuccinate lyase}}
−
{{#set: ec-number=ec-2.7.2.4}}
+
{{#set: ec-number=ec-4.3.2.1}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction ARGSUCCINLYA-RXN

  • direction:
    • reversible
  • common-name:
    • argininosuccinate lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-4983, nitric oxide biosynthesis II (mammals):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaea):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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