Difference between revisions of "ARGSUCCINSYN-RXN"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-tryptophan:2-oxoglutarate aminotransferase * ec-number: **...")
(Created page with "Category:reaction == Reaction RXN-14455 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.6.3.54 ec-3.6.3.54] == Reaction formula == * 1 AT...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN ==
+
== Reaction RXN-14455 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** l-tryptophan:2-oxoglutarate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
+
** [http://enzyme.expasy.org/EC/3.6.3.54 ec-3.6.3.54]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CU+]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CU+]][e] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04188]]
+
* Gene: [[SJ05686]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03995]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17633]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00612]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17631]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II:
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate):
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
+
{{#set: ec-number=ec-3.6.3.54}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=5}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.27}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:28, 15 January 2021

Reaction RXN-14455

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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