Difference between revisions of "ARGSUCCINSYN-RXN"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** l-tryptophan:2-oxoglutarate aminotransferase * ec-number: **...")
(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * direction: ** left-to-right * common-name: ** argininosuccinate synthase * ec-number: ** [http://enzyme.expasy.org/EC/6...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRYPTOPHAN-AMINOTRANSFERASE-RXN ==
+
== Reaction ARGSUCCINSYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-tryptophan:2-oxoglutarate aminotransferase
+
** argininosuccinate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
+
** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04188]]
+
* Gene: [[SJ10377]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II:
+
* [[PWY-7400]], L-arginine biosynthesis IV (archaea):
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol):
+
* [[PWY-4984]], urea cycle:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate):
+
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria):
+
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR138060
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
+
** [http://www.uniprot.org/uniprot/P22768 P22768]
−
{{#set: ec-number=ec-2.6.1.27}}
+
** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
 +
** [http://www.uniprot.org/uniprot/P00966 P00966]
 +
** [http://www.uniprot.org/uniprot/P16460 P16460]
 +
** [http://www.uniprot.org/uniprot/P13256 P13256]
 +
** [http://www.uniprot.org/uniprot/P13257 P13257]
 +
** [http://www.uniprot.org/uniprot/P09034 P09034]
 +
** [http://www.uniprot.org/uniprot/P24532 P24532]
 +
** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
 +
** [http://www.uniprot.org/uniprot/P57799 P57799]
 +
** [http://www.uniprot.org/uniprot/Q60174 Q60174]
 +
** [http://www.uniprot.org/uniprot/P44315 P44315]
 +
** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
 +
** [http://www.uniprot.org/uniprot/P50986 P50986]
 +
** [http://www.uniprot.org/uniprot/Q06734 Q06734]
 +
** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
 +
** [http://www.uniprot.org/uniprot/Q59491 Q59491]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=argininosuccinate synthase}}
 +
{{#set: ec-number=ec-6.3.4.5}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction ARGSUCCINSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • argininosuccinate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7400, L-arginine biosynthesis IV (archaea):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
    • 5 reactions found over 4 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4983, nitric oxide biosynthesis II (mammals):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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