Difference between revisions of "ARGSUCCINSYN-RXN"

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(Created page with "Category:reaction == Reaction AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN == * direction: ** left-to-right * common-name: ** 2-amino-3-carboxymuconate-6-semialdehyde decarboxyl...")
(Created page with "Category:reaction == Reaction 2.5.1.58-RXN == * direction: ** reversible * common-name: ** farnesyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN ==
+
== Reaction 2.5.1.58-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
+
** farnesyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.45 ec-4.1.1.45]
+
** [http://enzyme.expasy.org/EC/2.5.1.58 ec-2.5.1.58]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2-AMINOMUCONATE_SEMIALDEHYDE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[FARNESYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[Protein-S-farnesyl-L-cysteines]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02880]]
+
* Gene: [[SJ06255]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17982]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5654]], 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5647]], 2-nitrobenzoate degradation I:
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16558 16558]
+
{{#set: common-name=farnesyltransferase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-2.5.1.58}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04323 R04323]
+
{{#set: nb gene associated=2}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb pathway associated=0}}
−
{{#set: common-name=2-amino-3-carboxymuconate-6-semialdehyde decarboxylase}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: ec-number=ec-4.1.1.45}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:38, 5 January 2021

Reaction 2.5.1.58-RXN

  • direction:
    • reversible
  • common-name:
    • farnesyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ARGSUCCINSYN-RXN&oldid=78026"