Difference between revisions of "ASPARTATEKIN-RXN"

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(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-RXN == * direction: ** reversible * common-name: ** nad-dependent glutamate dehydrogenase * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * direction: ** reversible * common-name: ** aspartate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-DEHYDROGENASE-RXN ==
+
== Reaction ASPARTATEKIN-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** nad-dependent glutamate dehydrogenase
+
** aspartate kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2]
+
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00250]]
+
* Gene: [[SJ09366]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06433]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ22223]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20174]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10621]]
+
* Gene: [[SJ10093]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTAMATE-DEG1-PWY]], L-glutamate degradation I:
+
* [[PWY-5097]], L-lysine biosynthesis VI:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
+
* [[PWY-6559]], spermidine biosynthesis II:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P101-PWY]], ectoine biosynthesis:
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2941]], L-lysine biosynthesis II:
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6562]], norspermidine biosynthesis:
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7153]], grixazone biosynthesis:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7126]], ethene biosynthesis IV (engineered):
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 
−
** '''7''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* METANETX-RXN : MNXR100085
+
* METANETX-RXN : MNXR96085
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15136 15136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00243 R00243]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P20016 P20016]
+
** [http://www.uniprot.org/uniprot/P08495 P08495]
−
** [http://www.uniprot.org/uniprot/P28997 P28997]
+
** [http://www.uniprot.org/uniprot/P44505 P44505]
−
** [http://www.uniprot.org/uniprot/P41755 P41755]
+
** [http://www.uniprot.org/uniprot/P27725 P27725]
−
** [http://www.uniprot.org/uniprot/Q9JTP6 Q9JTP6]
+
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
−
** [http://www.uniprot.org/uniprot/P00365 P00365]
+
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
−
** [http://www.uniprot.org/uniprot/P93541 P93541]
+
** [http://www.uniprot.org/uniprot/P00561 P00561]
−
** [http://www.uniprot.org/uniprot/P80319 P80319]
+
** [http://www.uniprot.org/uniprot/P00562 P00562]
−
** [http://www.uniprot.org/uniprot/P24295 P24295]
+
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
−
** [http://www.uniprot.org/uniprot/P27346 P27346]
+
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
−
** [http://www.uniprot.org/uniprot/P33327 P33327]
+
** [http://www.uniprot.org/uniprot/P53553 P53553]
−
** [http://www.uniprot.org/uniprot/Q43260 Q43260]
+
** [http://www.uniprot.org/uniprot/P10869 P10869]
−
** [http://www.uniprot.org/uniprot/O04937 O04937]
+
** [http://www.uniprot.org/uniprot/P08660 P08660]
−
** [http://www.uniprot.org/uniprot/Q25415 Q25415]
+
** [http://www.uniprot.org/uniprot/P26512 P26512]
−
** [http://www.uniprot.org/uniprot/O74024 O74024]
+
** [http://www.uniprot.org/uniprot/P37142 P37142]
−
** [http://www.uniprot.org/uniprot/O59650 O59650]
+
** [http://www.uniprot.org/uniprot/P41403 P41403]
 +
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
 +
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 +
** [http://www.uniprot.org/uniprot/P49079 P49079]
 +
** [http://www.uniprot.org/uniprot/P49080 P49080]
 +
** [http://www.uniprot.org/uniprot/P93402 P93402]
 +
** [http://www.uniprot.org/uniprot/O81852 O81852]
 +
** [http://www.uniprot.org/uniprot/O63067 O63067]
 +
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
</div>
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=nad-dependent glutamate dehydrogenase}}
+
{{#set: common-name=aspartate kinase}}
−
{{#set: ec-number=ec-1.4.1.2}}
+
{{#set: ec-number=ec-2.7.2.4}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=9}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction ASPARTATEKIN-RXN

  • direction:
    • reversible
  • common-name:
    • aspartate kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559, spermidine biosynthesis II:
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY, ectoine biosynthesis:
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941, L-lysine biosynthesis II:
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562, norspermidine biosynthesis:
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153, grixazone biosynthesis:
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY, L-homoserine biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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