Difference between revisions of "ATCDm"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-2962 == * direction: ** left-to-right * common-name: ** formaldehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.284...")
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799] ==
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== Reaction RXN-2962 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
** fatty acid biosynthesis (plant mitochondria)
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** formaldehyde dehydrogenase
== Reaction(s) found ==
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* ec-number:
* [[MALONYL-COA-ACP-TRANSACYL-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.284 ec-1.1.1.284]
== Reaction(s) not found ==
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== Reaction formula ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12360 RXN-12360]
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* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[S-HYDROXYMETHYLGLUTATHIONE]][c] '''=>''' 1 [[CPD-548]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12361 RXN-12361]
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== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12359 RXN-12359]
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* Gene: [[SJ21601]]
{{#set: taxonomic-range=tax-33090}}
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** Category: [[annotation]]
{{#set: common-name=fatty acid biosynthesis (plant mitochondria)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: nb reaction found=1}}
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** Category: [[orthology]]
{{#set: completion rate=0.25}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: nb total reaction=4}}
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== Pathway(s)  ==
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* [[PWY-1801]], formaldehyde oxidation II (glutathione-dependent):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07140 R07140]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=formaldehyde dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.284}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction RXN-2962

  • direction:
    • left-to-right
  • common-name:
    • formaldehyde dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1801, formaldehyde oxidation II (glutathione-dependent):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links