Difference between revisions of "Annotation"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-SYN-RXN GLUTATHIONE-SYN-RXN] == * direction: ** left-to-right * common-name: ** glutath...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14284 RXN-14284] == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-SYN-RXN GLUTATHIONE-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14284 RXN-14284] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutathione synthetase
+
** phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.3 ec-6.3.2.3]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[MALTOPENTAOSE]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[GLC-1-P]][c] '''+''' 1 [[MALTOTETRAOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10036]]
+
* Gene: [[SJ18078]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTATHIONESYN-PWY]], glutathione biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONESYN-PWY GLUTATHIONESYN-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13558 13558]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00497 R00497]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JTJ6 Q9JTJ6]
 
−
** [http://www.uniprot.org/uniprot/P46413 P46413]
 
−
** [http://www.uniprot.org/uniprot/P45480 P45480]
 
−
** [http://www.uniprot.org/uniprot/P35667 P35667]
 
−
** [http://www.uniprot.org/uniprot/P35669 P35669]
 
−
** [http://www.uniprot.org/uniprot/P35668 P35668]
 
−
** [http://www.uniprot.org/uniprot/P48637 P48637]
 
−
** [http://www.uniprot.org/uniprot/P46416 P46416]
 
−
** [http://www.uniprot.org/uniprot/P51855 P51855]
 
−
** [http://www.uniprot.org/uniprot/P73493 P73493]
 
−
** [http://www.uniprot.org/uniprot/P04425 P04425]
 
−
** [http://www.uniprot.org/uniprot/O22494 O22494]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutathione synthetase}}
+
{{#set: common-name=phosphorylase}}
−
{{#set: ec-number=ec-6.3.2.3}}
+
{{#set: ec-number=ec-2.4.1.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction RXN-14284

  • direction:
    • left-to-right
  • common-name:
    • phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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