Difference between revisions of "BRANCHED-CHAINAMINOTRANSFERLEU-RXN"

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(Created page with "Category:reaction == Reaction METHYLVALERATE-RXN == * direction: ** reversible * common-name: ** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)...")
(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * direction: ** reversible * common-name: ** leucine transaminase * ec-number: ** [http://enzyme.expasy...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction METHYLVALERATE-RXN ==
+
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** 3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)
+
** leucine transaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
+
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
 +
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[BCAA-dehydrogenase-2MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18449]]
+
* Gene: [[SJ06412]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11017]]
+
* Gene: [[SJ04586]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17677]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[LEU-DEG2-PWY]], L-leucine degradation I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5076]], L-leucine degradation III:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7767]], L-leucine degradation IV (reductive Stickland reaction):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR96229
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
** [http://www.uniprot.org/uniprot/P38891 P38891]
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
** [http://www.uniprot.org/uniprot/P47176 P47176]
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
** [http://www.uniprot.org/uniprot/O86505 O86505]
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
** [http://www.uniprot.org/uniprot/O14370 O14370]
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
+
** [http://www.uniprot.org/uniprot/O32954 O32954]
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
+
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
 
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
 
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
 
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
 
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
 
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
 
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
 
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
 
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=3-methyl-2-oxobutanoate dehydrogenase [(s)-2-methylbutanoyl-transferring)}}
+
{{#set: common-name=leucine transaminase}}
−
{{#set: ec-number=ec-1.2.4.4}}
+
{{#set: ec-number=ec-2.6.1.42|ec-2.6.1.6}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEU-DEG2-PWY, L-leucine degradation I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5076, L-leucine degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7767, L-leucine degradation IV (reductive Stickland reaction):
    • 1 reactions found over 5 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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