Difference between revisions of "CAFFEOYL-COA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] == * direction: ** left-to-right * common-name: ** glutamine syn...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.37-RXN 3.1.4.37-RXN] == * direction: ** left-to-right * common-name: ** 2',3'-cyclic-nucleoti...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.37-RXN 3.1.4.37-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamine synthetase
+
** 2',3'-cyclic-nucleotide 3'-phosphodiesterase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.1.2 ec-6.3.1.2]
+
** [http://enzyme.expasy.org/EC/3.1.4.37 ec-3.1.4.37]
−
* synonymous:
 
−
** type i glutamate--ammonia ligase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Cyclic-2-3-Ribonucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-Prime-Ribonucleoside-Monophosphates]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03939]]
+
* Gene: [[SJ09375]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08357]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12766]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLNSYN-PWY]], L-glutamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLNSYN-PWY GLNSYN-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
 
−
** '''4''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14490 14490]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00253 R00253]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03422 R03422]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P15103 P15103]
+
** [http://www.uniprot.org/uniprot/P13233 P13233]
−
** [http://www.uniprot.org/uniprot/P15124 P15124]
+
** [http://www.uniprot.org/uniprot/P06623 P06623]
−
** [http://www.uniprot.org/uniprot/P15623 P15623]
+
** [http://www.uniprot.org/uniprot/P16330 P16330]
−
** [http://www.uniprot.org/uniprot/P21154 P21154]
+
** [http://www.uniprot.org/uniprot/P09543 P09543]
−
** [http://www.uniprot.org/uniprot/P45627 P45627]
+
** [http://www.uniprot.org/uniprot/Q7M3I0 Q7M3I0]
−
** [http://www.uniprot.org/uniprot/Q59982 Q59982]
 
−
** [http://www.uniprot.org/uniprot/Q7M314 Q7M314]
 
−
** [http://www.uniprot.org/uniprot/Q60182 Q60182]
 
−
** [http://www.uniprot.org/uniprot/P04078 P04078]
 
−
** [http://www.uniprot.org/uniprot/P00964 P00964]
 
−
** [http://www.uniprot.org/uniprot/P22248 P22248]
 
−
** [http://www.uniprot.org/uniprot/P07804 P07804]
 
−
** [http://www.uniprot.org/uniprot/P13564 P13564]
 
−
** [http://www.uniprot.org/uniprot/P12425 P12425]
 
−
** [http://www.uniprot.org/uniprot/P19064 P19064]
 
−
** [http://www.uniprot.org/uniprot/P16580 P16580]
 
−
** [http://www.uniprot.org/uniprot/P10656 P10656]
 
−
** [http://www.uniprot.org/uniprot/P11600 P11600]
 
−
** [http://www.uniprot.org/uniprot/P0A1P6 P0A1P6]
 
−
** [http://www.uniprot.org/uniprot/P0A9C5 P0A9C5]
 
−
** [http://www.uniprot.org/uniprot/P00965 P00965]
 
−
** [http://www.uniprot.org/uniprot/P04771 P04771]
 
−
** [http://www.uniprot.org/uniprot/P04770 P04770]
 
−
** [http://www.uniprot.org/uniprot/P15102 P15102]
 
−
** [http://www.uniprot.org/uniprot/P10583 P10583]
 
−
** [http://www.uniprot.org/uniprot/P23712 P23712]
 
−
** [http://www.uniprot.org/uniprot/P15105 P15105]
 
−
** [http://www.uniprot.org/uniprot/P08282 P08282]
 
−
** [http://www.uniprot.org/uniprot/P08281 P08281]
 
−
** [http://www.uniprot.org/uniprot/P07694 P07694]
 
−
** [http://www.uniprot.org/uniprot/P09606 P09606]
 
−
** [http://www.uniprot.org/uniprot/P14654 P14654]
 
−
** [http://www.uniprot.org/uniprot/P14655 P14655]
 
−
** [http://www.uniprot.org/uniprot/P14656 P14656]
 
−
** [http://www.uniprot.org/uniprot/P22878 P22878]
 
−
** [http://www.uniprot.org/uniprot/P19432 P19432]
 
−
** [http://www.uniprot.org/uniprot/P15106 P15106]
 
−
** [http://www.uniprot.org/uniprot/P19904 P19904]
 
−
** [http://www.uniprot.org/uniprot/P14636 P14636]
 
−
** [http://www.uniprot.org/uniprot/P04772 P04772]
 
−
** [http://www.uniprot.org/uniprot/P09826 P09826]
 
−
** [http://www.uniprot.org/uniprot/P05457 P05457]
 
−
** [http://www.uniprot.org/uniprot/Q9JSU6 Q9JSU6]
 
−
** [http://www.uniprot.org/uniprot/Q9PPK8 Q9PPK8]
 
−
** [http://www.uniprot.org/uniprot/O66514 O66514]
 
−
** [http://www.uniprot.org/uniprot/Q8X7G0 Q8X7G0]
 
−
** [http://www.uniprot.org/uniprot/Q9CDL9 Q9CDL9]
 
−
** [http://www.uniprot.org/uniprot/Q05650 Q05650]
 
−
** [http://www.uniprot.org/uniprot/P43794 P43794]
 
−
** [http://www.uniprot.org/uniprot/P31592 P31592]
 
−
** [http://www.uniprot.org/uniprot/Q27747 Q27747]
 
−
** [http://www.uniprot.org/uniprot/P12424 P12424]
 
−
** [http://www.uniprot.org/uniprot/Q04831 Q04831]
 
−
** [http://www.uniprot.org/uniprot/P24099 P24099]
 
−
** [http://www.uniprot.org/uniprot/O04998 O04998]
 
−
** [http://www.uniprot.org/uniprot/O04999 O04999]
 
−
** [http://www.uniprot.org/uniprot/P20479 P20479]
 
−
** [http://www.uniprot.org/uniprot/O75014 O75014]
 
−
** [http://www.uniprot.org/uniprot/P23794 P23794]
 
−
** [http://www.uniprot.org/uniprot/Q43127 Q43127]
 
−
** [http://www.uniprot.org/uniprot/Q9FHR0 Q9FHR0]
 
−
** [http://www.uniprot.org/uniprot/Q9C8C7 Q9C8C7]
 
−
** [http://www.uniprot.org/uniprot/P28786 P28786]
 
−
** [http://www.uniprot.org/uniprot/Q02154 Q02154]
 
−
** [http://www.uniprot.org/uniprot/Q05542 Q05542]
 
−
** [http://www.uniprot.org/uniprot/Q42624 Q42624]
 
−
** [http://www.uniprot.org/uniprot/P43518 P43518]
 
−
** [http://www.uniprot.org/uniprot/P52783 P52783]
 
−
** [http://www.uniprot.org/uniprot/Q43759 Q43759]
 
−
** [http://www.uniprot.org/uniprot/P38559 P38559]
 
−
** [http://www.uniprot.org/uniprot/P38560 P38560]
 
−
** [http://www.uniprot.org/uniprot/P38561 P38561]
 
−
** [http://www.uniprot.org/uniprot/P38562 P38562]
 
−
** [http://www.uniprot.org/uniprot/P38563 P38563]
 
−
** [http://www.uniprot.org/uniprot/P25462 P25462]
 
−
** [http://www.uniprot.org/uniprot/Q42625 Q42625]
 
−
** [http://www.uniprot.org/uniprot/P46410 P46410]
 
−
** [http://www.uniprot.org/uniprot/Q42802 Q42802]
 
−
** [http://www.uniprot.org/uniprot/Q42623 Q42623]
 
−
** [http://www.uniprot.org/uniprot/Q53045 Q53045]
 
−
** [http://www.uniprot.org/uniprot/P32288 P32288]
 
−
** [http://www.uniprot.org/uniprot/Q43066 Q43066]
 
−
** [http://www.uniprot.org/uniprot/Q59195 Q59195]
 
−
** [http://www.uniprot.org/uniprot/P51118 P51118]
 
−
** [http://www.uniprot.org/uniprot/P51119 P51119]
 
−
** [http://www.uniprot.org/uniprot/Q42950 Q42950]
 
−
** [http://www.uniprot.org/uniprot/Q42951 Q42951]
 
−
** [http://www.uniprot.org/uniprot/Q07939 Q07939]
 
−
** [http://www.uniprot.org/uniprot/Q43760 Q43760]
 
−
** [http://www.uniprot.org/uniprot/Q42688 Q42688]
 
−
** [http://www.uniprot.org/uniprot/Q42689 Q42689]
 
−
** [http://www.uniprot.org/uniprot/O22504 O22504]
 
−
** [http://www.uniprot.org/uniprot/O22505 O22505]
 
−
** [http://www.uniprot.org/uniprot/O22506 O22506]
 
−
** [http://www.uniprot.org/uniprot/Q59972 Q59972]
 
−
** [http://www.uniprot.org/uniprot/Q9UWN1 Q9UWN1]
 
−
** [http://www.uniprot.org/uniprot/Q9RDW7 Q9RDW7]
 
−
** [http://www.uniprot.org/uniprot/P43386 P43386]
 
−
** [http://www.uniprot.org/uniprot/P0A040 P0A040]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamine synthetase}}
+
{{#set: common-name=2',3'-cyclic-nucleotide 3'-phosphodiesterase}}
−
{{#set: ec-number=ec-6.3.1.2}}
+
{{#set: ec-number=ec-3.1.4.37}}
−
{{#set: synonymous=type i glutamate--ammonia ligase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=7}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction 3.1.4.37-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2',3'-cyclic-nucleotide 3'-phosphodiesterase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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