Difference between revisions of "CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction SUCCSEMIALDDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** succinate-semialdehyde dehydrogenase [nad(p)+] * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104] ==...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction SUCCSEMIALDDEHYDROG-RXN ==
+
== Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** succinate-semialdehyde dehydrogenase [nad(p)+]
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.2.1.79 ec-1.2.1.79]
+
** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05897]]
+
* Gene: [[SJ01911]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6537]], 4-aminobutanoate degradation II:
+
* [[PWY-6039]], chlorogenic acid biosynthesis I:
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
+
* [[PWY-361]], phenylpropanoid biosynthesis:
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''7''' reactions found over '''15''' reactions in the full pathway
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway):
+
* [[PWY-7398]], coumarins biosynthesis (engineered):
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
* [[P181-PWY]], nicotine degradation I (pyridine pathway):
+
* [[PWY-5710]], capsaicin biosynthesis:
** '''2''' reactions found over '''17''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation:
+
* [[PWY-6792]], scopoletin biosynthesis:
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY-7498]], phenylpropanoids methylation (ice plant):
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR107243
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13214 13214]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16926 16926]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
+
** [http://www.uniprot.org/uniprot/P28034 P28034]
** [http://www.uniprot.org/uniprot/P25526 P25526]
+
** [http://www.uniprot.org/uniprot/O65307 O65307]
** [http://www.uniprot.org/uniprot/O85997 O85997]
+
** [http://www.uniprot.org/uniprot/Q42945 Q42945]
 +
** [http://www.uniprot.org/uniprot/O24144 O24144]
 +
** [http://www.uniprot.org/uniprot/O24149 O24149]
 +
** [http://www.uniprot.org/uniprot/O24150 O24150]
 +
** [http://www.uniprot.org/uniprot/O24151 O24151]
 +
** [http://www.uniprot.org/uniprot/O04899 O04899]
 +
** [http://www.uniprot.org/uniprot/O49499 O49499]
 +
** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
 +
** [http://www.uniprot.org/uniprot/Q40313 Q40313]
 +
** [http://www.uniprot.org/uniprot/Q43095 Q43095]
 +
** [http://www.uniprot.org/uniprot/O04854 O04854]
 +
** [http://www.uniprot.org/uniprot/O65162 O65162]
 +
** [http://www.uniprot.org/uniprot/O65362 O65362]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=succinate-semialdehyde dehydrogenase [nad(p)+]}}
+
{{#set: ec-number=ec-2.1.1.104}}
{{#set: ec-number=ec-1.2.1.79}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=7}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Latest revision as of 11:21, 18 March 2021

Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6039, chlorogenic acid biosynthesis I:
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis:
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered):
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-5710, capsaicin biosynthesis:
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6792, scopoletin biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 20 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant):
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links