Difference between revisions of "CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-12377 == * direction: ** left-to-right * common-name: ** trna (guanine26-n2)-dimethyltransferase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction SUCCSEMIALDDEHYDROG-RXN == * direction: ** left-to-right * common-name: ** succinate-semialdehyde dehydrogenase [nad(p)+] * ec-number: ** [ht...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12377 ==
+
== Reaction SUCCSEMIALDDEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** trna (guanine26-n2)-dimethyltransferase
+
** succinate-semialdehyde dehydrogenase [nad(p)+]
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.216 ec-2.1.1.216]
+
** [http://enzyme.expasy.org/EC/1.2.1.79 ec-1.2.1.79]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Guanine26-in-tRNA]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[ADENOSYL-HOMO-CYS]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-N2-dimethylguanine-26]][c]
+
* 1 [[NADP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14807]]
+
* Gene: [[SJ05897]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09381]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6537]], 4-aminobutanoate degradation II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway):
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[P181-PWY]], nicotine degradation I (pyridine pathway):
 +
** '''2''' reactions found over '''17''' reactions in the full pathway
 +
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation:
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13214 13214]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
 +
** [http://www.uniprot.org/uniprot/P25526 P25526]
 +
** [http://www.uniprot.org/uniprot/O85997 O85997]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trna (guanine26-n2)-dimethyltransferase}}
+
{{#set: common-name=succinate-semialdehyde dehydrogenase [nad(p)+]}}
−
{{#set: ec-number=ec-2.1.1.216}}
+
{{#set: ec-number=ec-1.2.1.79}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:34, 5 January 2021

Reaction SUCCSEMIALDDEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • succinate-semialdehyde dehydrogenase [nad(p)+]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6537, 4-aminobutanoate degradation II:
    • 2 reactions found over 2 reactions in the full pathway
  • P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase):
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6993, nicotine degradation II (pyrrolidine pathway):
    • 1 reactions found over 11 reactions in the full pathway
  • P181-PWY, nicotine degradation I (pyridine pathway):
    • 2 reactions found over 17 reactions in the full pathway
  • 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY, 4-hydroxyphenylacetate degradation:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "succinate-semialdehyde dehydrogenase [nad(p)+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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