Difference between revisions of "CDPKIN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
(Created page with "Category:reaction == Reaction RXN3O-102 == * direction: ** left-to-right * common-name: ** 3-demethylubiquinol-6 3-o-methyltransferase ** s-adenosyl-l-methionine:2-hexapre...")
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] ==
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== Reaction RXN3O-102 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
 
 
* common-name:
 
* common-name:
** tca cycle ii (plants and fungi)
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** 3-demethylubiquinol-6 3-o-methyltransferase
== Reaction(s) found ==
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** s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase
* [[2OXOGLUTARATEDEH-RXN]]
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* ec-number:
* [[ACONITATEDEHYDR-RXN]]
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** [http://enzyme.expasy.org/EC/2.1.1.64 ec-2.1.1.64]
* [[ACONITATEHYDR-RXN]]
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== Reaction formula ==
* [[CITSYN-RXN]]
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* 1 [[2-HEXAPRENYL-3-METHYL-5-HYDROXY-6-METHOX]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UBIQUINOL-30]][c]
* [[FUMHYDR-RXN]]
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== Gene(s) associated with this reaction  ==
* [[MALATE-DEH-RXN]]
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* Gene: [[SJ13007]]
* [[RXN-14971]]
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** Category: [[annotation]]
* [[SUCCCOASYN-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
== Reaction(s) not found ==
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* Gene: [[SJ16864]]
* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
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** Category: [[annotation]]
{{#set: taxonomic-range=tax-4751|tax-33090}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: common-name=tca cycle ii (plants and fungi)}}
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== Pathway(s)  ==
{{#set: nb reaction found=8}}
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* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
{{#set: completion rate=0.89}}
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** '''4''' reactions found over '''8''' reactions in the full pathway
{{#set: nb total reaction=9}}
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* [[PWY-7230]], ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast):
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7233]], ubiquinol-6 bypass biosynthesis (eukaryotic):
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44401 44401]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02175 R02175]
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{{#set: direction=left-to-right}}
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{{#set: common-name=s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase|3-demethylubiquinol-6 3-o-methyltransferase}}
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{{#set: ec-number=ec-2.1.1.64}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:45, 18 December 2020

Reaction RXN3O-102

  • direction:
    • left-to-right
  • common-name:
    • 3-demethylubiquinol-6 3-o-methyltransferase
    • s-adenosyl-l-methionine:2-hexaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol o-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic):
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7230, ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast):
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233, ubiquinol-6 bypass biosynthesis (eukaryotic):
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links