Difference between revisions of "CHD-RXN"

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(Created page with "Category:reaction == Reaction RXN-7933 == * direction: ** left-to-right * common-name: ** acetylcitrulline deacetylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.1...")
(Created page with "Category:reaction == Reaction RXN-14025 == * direction: ** left-to-right * common-name: ** ump phosphatase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7933 ==
+
== Reaction RXN-14025 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** acetylcitrulline deacetylase
+
** ump phosphatase
 +
** 5'-nucleotidase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.1.16 ec-3.5.1.16]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-7224]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[L-CITRULLINE]][c]
+
* 1 [[UMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ01931]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ22394]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18895]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16098]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09030]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18402]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
+
* [[PWY-7821]], tunicamycin biosynthesis:
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7185]], UTP and CTP dephosphorylation I:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* RHEA:
** [http://www.genome.jp/dbget-bin/www_bget?R09107 R09107]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=acetylcitrulline deacetylase}}
+
{{#set: common-name=5'-nucleotidase|ump phosphatase}}
{{#set: ec-number=ec-3.5.1.16}}
+
{{#set: ec-number=ec-3.1.3.5}}
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=5}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:18, 14 January 2021

Reaction RXN-14025

  • direction:
    • left-to-right
  • common-name:
    • ump phosphatase
    • 5'-nucleotidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7821, tunicamycin biosynthesis:
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7185, UTP and CTP dephosphorylation I:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links