Difference between revisions of "CPD-13004"

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(Created page with "Category:gene == Gene SJ06139 == * transcription-direction: ** positive * right-end-position: ** 78253 * left-end-position: ** 65175 * centisome-position: ** 78.22721...")
 
(Created page with "Category:gene == Gene SJ02643 == * transcription-direction: ** negative * right-end-position: ** 131768 * left-end-position: ** 117256 * centisome-position: ** 21.921352...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ06139 ==
+
== Gene SJ02643 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 78253
+
** 131768
 
* left-end-position:
 
* left-end-position:
** 65175
+
** 117256
 
* centisome-position:
 
* centisome-position:
** 78.22721    
+
** 21.921352    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ATPASE-RXN]]
* [[GLUTATHIONE-PEROXIDASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GSHTRAN-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GST-RXN]]
+
* [[RXN-11109]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PEROXID-RXN]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-13673]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-14240]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15288]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-15680]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17352]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8635]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
* [[DETOX1-PWY-1]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7198]]
* [[PWY-4081]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7184]]
* [[PWY-6842]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
** '''5''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6545]]
* [[PWY-4061]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
** '''4''' reactions found over '''8''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
* [[PWY66-374]]
+
{{#set: right-end-position=131768}}
** '''2''' reactions found over '''5''' reactions in the full pathway
+
{{#set: left-end-position=117256}}
* [[PWY-7112]]
+
{{#set: centisome-position=21.921352   }}
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7445]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7533]]
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5466]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6824]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-5469]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=78253}}
 
{{#set: left-end-position=65175}}
 
{{#set: centisome-position=78.22721   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=6}}
{{#set: nb pathway associated=13}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:23, 26 August 2019

Gene SJ02643

  • transcription-direction:
    • negative
  • right-end-position:
    • 131768
  • left-end-position:
    • 117256
  • centisome-position:
    • 21.921352

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway