Difference between revisions of "CPD-14282"

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(Created page with "Category:gene == Gene SJ15153 == * transcription-direction: ** positive * right-end-position: ** 39036 * left-end-position: ** 30494 * centisome-position: ** 10.143973...")
(Created page with "Category:metabolite == Metabolite CPD-14282 == * common-name: ** trans-lignocer-2-enoyl-coa * smiles: ** cccccccccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ15153 ==
+
== Metabolite CPD-14282 ==
* transcription-direction:
+
* common-name:
** positive
+
** trans-lignocer-2-enoyl-coa
* right-end-position:
+
* smiles:
** 39036
+
** cccccccccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
* left-end-position:
+
* inchi-key:
** 30494
+
** uvjkzcsqlmwpmv-lqjawxtisa-j
* centisome-position:
+
* molecular-weight:
** 10.143973   
+
** 1112.113
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[RXN-13308]]
== Reaction(s) associated ==
+
* [[TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37.]]
* [[ATPASE-RXN]]
+
== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
+
* [[RXN-13304]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
== Reaction(s) of unknown directionality ==
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
{{#set: common-name=trans-lignocer-2-enoyl-coa}}
** Category: [[annotation]]
+
{{#set: inchi-key=inchikey=uvjkzcsqlmwpmv-lqjawxtisa-j}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: molecular-weight=1112.113}}
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-7210]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=39036}}
 
{{#set: left-end-position=30494}}
 
{{#set: centisome-position=10.143973    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-14282

  • common-name:
    • trans-lignocer-2-enoyl-coa
  • smiles:
    • cccccccccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
  • inchi-key:
    • uvjkzcsqlmwpmv-lqjawxtisa-j
  • molecular-weight:
    • 1112.113

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality