Difference between revisions of "CPD-17063"

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(Created page with "Category:gene == Gene SJ15450 == * transcription-direction: ** negative * right-end-position: ** 178966 * left-end-position: ** 164865 * centisome-position: ** 55.776398...")
 
(Created page with "Category:gene == Gene SJ17411 == * transcription-direction: ** positive * right-end-position: ** 151789 * left-end-position: ** 144911 * centisome-position: ** 55.11433...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ15450 ==
+
== Gene SJ17411 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 178966
+
** 151789
 
* left-end-position:
 
* left-end-position:
** 164865
+
** 144911
 
* centisome-position:
 
* centisome-position:
** 55.776398    
+
** 55.11433    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[NADH-DEHYDROG-A-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[5.3.4.1-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[DISULISOM-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15684]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN0-5330]]
+
* [[THIOL-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6797]]
* [[PWY0-1335]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6147]]
* [[PWY-4302]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-3781]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1334]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6692]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5083]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7279]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1573]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7269]]
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY0-1568]]
+
* [[PWY-7539]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
* [[PWY0-1567]]
+
* [[PWY-7533]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
</div>
+
{{#set: transcription-direction=positive}}
{{#set: transcription-direction=negative}}
+
{{#set: right-end-position=151789}}
{{#set: right-end-position=178966}}
+
{{#set: left-end-position=144911}}
{{#set: left-end-position=164865}}
+
{{#set: centisome-position=55.11433   }}
{{#set: centisome-position=55.776398   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:24, 26 August 2019

Gene SJ17411

  • transcription-direction:
    • positive
  • right-end-position:
    • 151789
  • left-end-position:
    • 144911
  • centisome-position:
    • 55.11433

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway