Difference between revisions of "CPD-19151"
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(Created page with "Category:gene == Gene SJ01525 == * transcription-direction: ** positive * right-end-position: ** 50845 * left-end-position: ** 40546 * centisome-position: ** 27.01212...") |
(Created page with "Category:gene == Gene SJ05137 == * transcription-direction: ** negative * right-end-position: ** 111821 * left-end-position: ** 94708 * centisome-position: ** 18.881594...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05137 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 111821 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 94708 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 18.881594 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.101-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[2.4.1.223-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[2.4.1.94-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7426]] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-7920]] | ||
| + | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-6558]] | ||
| + | ** '''7''' reactions found over '''13''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=111821}} | ||
| + | {{#set: left-end-position=94708}} | ||
| + | {{#set: centisome-position=18.881594 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 09:27, 27 August 2019
Contents
Gene SJ05137
- transcription-direction:
- negative
- right-end-position:
- 111821
- left-end-position:
- 94708
- centisome-position:
- 18.881594
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.101-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.223-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.94-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7426
- 4 reactions found over 10 reactions in the full pathway
- PWY-7920
- 2 reactions found over 11 reactions in the full pathway
- PWY-6558
- 7 reactions found over 13 reactions in the full pathway
