Difference between revisions of "CPD-8080"

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(Created page with "Category:gene == Gene SJ09181 == * transcription-direction: ** positive * right-end-position: ** 39637 * left-end-position: ** 39140 * centisome-position: ** 88.807205...")
(Created page with "Category:gene == Gene SJ07922 == * transcription-direction: ** negative * right-end-position: ** 12596 * left-end-position: ** 6043 * centisome-position: ** 10.119566...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09181 ==
+
== Gene SJ07922 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 39637
+
** 12596
 
* left-end-position:
 
* left-end-position:
** 39140
+
** 6043
 
* centisome-position:
 
* centisome-position:
** 88.807205    
+
** 10.119566    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[FADSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: transcription-direction=positive}}
+
* [[RIBOFLAVINKIN-RXN]]
{{#set: right-end-position=39637}}
+
** Category: [[annotation]]
{{#set: left-end-position=39140}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: centisome-position=88.807205   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5187]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY66-366]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6167]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7863]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5523]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=12596}}
 +
{{#set: left-end-position=6043}}
 +
{{#set: centisome-position=10.119566   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=6}}

Revision as of 09:28, 27 August 2019

Gene SJ07922

  • transcription-direction:
    • negative
  • right-end-position:
    • 12596
  • left-end-position:
    • 6043
  • centisome-position:
    • 10.119566

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7863
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5523
    • 1 reactions found over 3 reactions in the full pathway