Difference between revisions of "CPD-8080"
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(Created page with "Category:gene == Gene SJ09181 == * transcription-direction: ** positive * right-end-position: ** 39637 * left-end-position: ** 39140 * centisome-position: ** 88.807205...") |
(Created page with "Category:gene == Gene SJ07922 == * transcription-direction: ** negative * right-end-position: ** 12596 * left-end-position: ** 6043 * centisome-position: ** 10.119566...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07922 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 12596 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 6043 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 10.119566 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[FADSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | * [[RIBOFLAVINKIN-RXN]] |
− | {{#set: right-end-position= | + | ** Category: [[annotation]] |
− | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: centisome-position= | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN0-5187]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY66-366]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[RIBOSYN2-PWY]] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-6167]] | ||
+ | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-6168]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7863]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5523]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=12596}} | ||
+ | {{#set: left-end-position=6043}} | ||
+ | {{#set: centisome-position=10.119566 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
+ | {{#set: nb pathway associated=6}} |
Revision as of 09:28, 27 August 2019
Contents
Gene SJ07922
- transcription-direction:
- negative
- right-end-position:
- 12596
- left-end-position:
- 6043
- centisome-position:
- 10.119566
Organism(s) associated with this gene
Reaction(s) associated
- FADSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RIBOFLAVINKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN0-5187
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-366
- 2 reactions found over 2 reactions in the full pathway
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-6167
- 5 reactions found over 10 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
- PWY-7863
- 1 reactions found over 7 reactions in the full pathway
- PWY-5523
- 1 reactions found over 3 reactions in the full pathway