Difference between revisions of "CPD-941"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == * direction: ** reversible * common-name:...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.126-RXN 2.1.1.126-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.126-RXN 2.1.1.126-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
+
* ec-number:
−
** 3-isopropylmalate dehydrogenase
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** [http://enzyme.expasy.org/EC/2.1.1.321 ec-2.1.1.321]
−
* synonymous:
 
−
** β-isopropylmalic enzyme
 
−
** threo-ds-3-isopropylmalate dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-7100]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Myelin-L-arginines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[Myelin-N-o-methyl-arginines]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21291]]
+
* Gene: [[SJ16975]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15815]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10895 10895]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426]
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** [http://www.genome.jp/dbget-bin/www_bget?R04719 R04719]
−
* UNIPROT:
+
{{#set: direction=left-to-right}}
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** [http://www.uniprot.org/uniprot/P05644 P05644]
+
{{#set: ec-number=ec-2.1.1.321}}
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** [http://www.uniprot.org/uniprot/P05645 P05645]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q01987 Q01987]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/Q00412 Q00412]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P08791 P08791]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P30125 P30125]
 
−
** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0]
 
−
** [http://www.uniprot.org/uniprot/O66607 O66607]
 
−
** [http://www.uniprot.org/uniprot/P12010 P12010]
 
−
** [http://www.uniprot.org/uniprot/P04173 P04173]
 
−
** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4]
 
−
** [http://www.uniprot.org/uniprot/P24098 P24098]
 
−
** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79]
 
−
** [http://www.uniprot.org/uniprot/P43860 P43860]
 
−
** [http://www.uniprot.org/uniprot/P41019 P41019]
 
−
** [http://www.uniprot.org/uniprot/P54354 P54354]
 
−
** [http://www.uniprot.org/uniprot/Q56268 Q56268]
 
−
** [http://www.uniprot.org/uniprot/P29102 P29102]
 
−
** [http://www.uniprot.org/uniprot/P37412 P37412]
 
−
** [http://www.uniprot.org/uniprot/P23390 P23390]
 
−
** [http://www.uniprot.org/uniprot/P29696 P29696]
 
−
** [http://www.uniprot.org/uniprot/P41766 P41766]
 
−
** [http://www.uniprot.org/uniprot/Q02143 Q02143]
 
−
** [http://www.uniprot.org/uniprot/P34733 P34733]
 
−
** [http://www.uniprot.org/uniprot/P50180 P50180]
 
−
** [http://www.uniprot.org/uniprot/Q12591 Q12591]
 
−
** [http://www.uniprot.org/uniprot/Q12590 Q12590]
 
−
** [http://www.uniprot.org/uniprot/Q12592 Q12592]
 
−
** [http://www.uniprot.org/uniprot/P07139 P07139]
 
−
** [http://www.uniprot.org/uniprot/P41926 P41926]
 
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** [http://www.uniprot.org/uniprot/P48012 P48012]
 
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** [http://www.uniprot.org/uniprot/P87256 P87256]
 
−
** [http://www.uniprot.org/uniprot/P87257 P87257]
 
−
** [http://www.uniprot.org/uniprot/P73960 P73960]
 
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** [http://www.uniprot.org/uniprot/O86504 O86504]
 
−
** [http://www.uniprot.org/uniprot/O85837 O85837]
 
−
** [http://www.uniprot.org/uniprot/P18869 P18869]
 
−
** [http://www.uniprot.org/uniprot/P34738 P34738]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=3-isopropylmalate dehydrogenase}}
 
−
{{#set: synonymous=&beta;-isopropylmalic enzyme|threo-ds-3-isopropylmalate dehydrogenase}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction 2.1.1.126-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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