Difference between revisions of "CSm"

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(Created page with "Category:reaction == Reaction RXN3O-130 == * direction: ** left-to-right * common-name: ** lanosterol,nadph:oxygen oxidoreductase (14-methyl cleaving) * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction RXN-8409 == * direction: ** left-to-right * common-name: ** prenylcysteine methylesterase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN3O-130 ==
+
== Reaction RXN-8409 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** lanosterol,nadph:oxygen oxidoreductase (14-methyl cleaving)
+
** prenylcysteine methylesterase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.14.13.70 ec-1.14.13.70]
+
** [http://enzyme.expasy.org/EC/3.1.1 ec-3.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[LANOSTEROL]][c] '''+''' 3 [[NADPH]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[44-DIMETHYL-CHOLESTA-814-24-TRIENOL]][c] '''+''' 1 [[FORMATE]][c] '''+''' 3 [[NADP]][c] '''+''' 4 [[WATER]][c]
+
* 1 [[PROTEIN-C-TERMINAL-S-FARNESYL-L-CYSTEINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[PROTEIN-C-TERMINAL-S-ETC-CYSTEINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ05072]]
+
* Gene: [[SJ19121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6074]], zymosterol biosynthesis:
 
** '''6''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25287 25287]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48521 48521]
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05640 R05640]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=lanosterol,nadph:oxygen oxidoreductase (14-methyl cleaving)}}
+
{{#set: common-name=prenylcysteine methylesterase}}
{{#set: ec-number=ec-1.14.13.70}}
+
{{#set: ec-number=ec-3.1.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:06, 5 January 2021

Reaction RXN-8409

  • direction:
    • left-to-right
  • common-name:
    • prenylcysteine methylesterase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links