Difference between revisions of "CYTIDEAM-RXN"

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(Created page with "Category:reaction == Reaction RXN-12243 == * direction: ** left-to-right * common-name: ** 15-cis-phytoene desaturase ** 15-cis phytoene desaturase * synonymous: ** plant-...")
(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase * e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12243 ==
+
== Reaction RXN-12587 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 15-cis-phytoene desaturase
+
** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase
−
** 15-cis phytoene desaturase
+
* ec-number:
−
* synonymous:
+
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
−
** plant-type phytoene desaturase
 
−
** pds
 
−
** phytoene desaturase (ambiguous)
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12321]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''=>''' 1 [[CPD-13171]][c] '''+''' 1 [[Plastoquinols]][c]
+
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08891]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ17324]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19133]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04060]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09474]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03223]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR117646
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30194 30194]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R09653 R09653]
+
{{#set: common-name=s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-2.8.1.7}}
−
{{#set: common-name=15-cis-phytoene desaturase|15-cis phytoene desaturase}}
+
{{#set: nb gene associated=6}}
−
{{#set: synonymous=pds|plant-type phytoene desaturase|phytoene desaturase (ambiguous)}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction RXN-12587

  • direction:
    • reversible
  • common-name:
    • s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR117646
  • LIGAND-RXN:
  • RHEA:

Property "Common-name" (as page type) with input value "s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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